Protein Alignment CHES-1-like and Foxn3

DIOPT Version :10

• Sequence 1: NP_511071.3
• Gene: CHES-1-like / 31678
• FlyBaseID: FBgn0029504
• Length: 1268
• Species: Drosophila melanogaster
• Sequence 2: XP_006240491.1
• Gene: Foxn3 / 314374
• RGDID: 1305711
• Length: 479
• Species: Rattus norvegicus
• Alignment Length: 577
• Identity: 157/577 - (27%)
• Similarity: 228/577 - (39%)
• Gaps: 166/577 - (28%)

  Fly   632 EDSLKEFDLVVSSRLHTSTPQYSVSKNGANGYGNG--NSNVNGSGAGSNTPQKQKHPNNVPYDPL 694
            |.::::.:|...:.||.       |||....:|..  .|.........:||....| :::|||..
  Rat    52 EGTMEDEELTNLNWLHE-------SKNLLKSFGESVLRSVSPVQDLDDDTPPSPAH-SDMPYDAR 108

  Fly   695 VHTNNKPPYSFSSLIFMAIEGSNEKALPVKEIYAWIVQHFPYFKTAPNGWKNSVRHNLSLNKSFV 759
            .:.|.|||||||.|||||||.|..|.||||:||.||::|||||..||.||||||||||||||.|.
  Rat   109 QNPNCKPPYSFSCLIFMAIEDSPTKRLPVKDIYNWILEHFPYFANAPTGWKNSVRHNLSLNKCFK 173

  Fly   760 KV--EKAPNMGKGSLWRVEPQQRQNLIQALNRSPFFPNSAVDKISPSLKSPSGGSAYDSLDGGGS 822
            ||  |::.::||||||.::|:.||||||||.::|:.|             |....||.|
  Rat   174 KVDKERSQSIGKGSLWCIDPEYRQNLIQALKKTPYHP-------------PPTPQAYQS------ 219

  Fly   823 GSVSSAQPVAGGAGVPAAAAVALSTPTKSNGLALANGASQATNAAR-PHSPNGGGSGSHARFDPY 886
               :|..|:..|           ||..|.||..|.:....|.:|.. .:||
  Rat   220 ---TSGPPIWPG-----------STFFKRNGALLQDPDIDAASAMMLLNSP-------------- 256

  Fly   887 LFPNLSKAFRNIREDTVGQPMLQDALDDELSGDYHNNNNNNSGSKYNYMGANGSGGAGSGGVGSN 951
              |.:...|                                            |.|....|....
  Rat   257 --PEIQAGF--------------------------------------------SPGVIQNGARVL 275

  Fly   952 ANGASDGINFARLARDCGADSIDDVHAAAAMLYLKHGPKIYSEPFQNGSGPVITSSPSEDHTYSA 1016
            :.|...|      ||..   .|..:...||:.......::.:|.......||::..|.|||.||:
  Rat   276 SRGLFPG------ARPL---PITPIGMTAAIRNSITSCRVRTESEPPCGSPVVSGDPKEDHNYSS 331

  Fly  1017 GGNSNADSGSST--PLTNGNALASVAQAVAQGQNNQGGAGSDSNCASSDAAYDSSEENHNITPEE 1079
            ..:|||.|.|.|  .:::.::.|......|...:.:|..||           ..|.|:|: .|||
  Rat   332 AKSSNARSTSPTSDSISSSSSSADDHYEFATKGSQEGSEGS-----------FQSHESHS-EPEE 384

  Fly  1080 MADRQRHRDGVDALLSLSGSSIVECGSVATTHYHSNGSSGSSHGSPHKRASSHSLEEEHLQQHRE 1144
            ...:...::|.|||                      |.||  :.|.|::       .:||.:.|:
  Rat   385 DDRKPSQKEGKDAL----------------------GDSG--YASQHRK-------RQHLAKARK 418

  Fly  1145 QQLQQQQQQQQHHHQQFGSSQAVYTNGSGSKMAL------LSSAAANVALAQQQQQQ 1195
            ........:::...:...|........:||.:.|      |::.....|..|::|::
  Rat   419 VPSDTLPLKKRRTEKPPESDDEEMKEAAGSLLHLAGIRSCLNNITNRTAKGQKEQKE 475

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CHES-1-like	NP_511071.3	FH_FOXN2-like	700..775	CDD:410805	55/76 (72%)
Foxn3	XP_006240491.1	FH_FOXN3	114..203	CDD:410833	62/88 (70%)