DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHES-1-like and foxd3

DIOPT Version :9

Sequence 1:NP_001259311.1 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_571365.2 Gene:foxd3 / 30548 ZFINID:ZDB-GENE-980526-143 Length:371 Species:Danio rerio


Alignment Length:196 Identity:61/196 - (31%)
Similarity:88/196 - (44%) Gaps:37/196 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   598 SLGGGGGGGGGSG--------------GGGGGGGANLRSPNSYASYDNEDSLKEFDLVVSSRLHT 648
            :|.||......||              |.|..|........|....|..|.::|.::...|.   
Zfish     2 TLSGGTSASNMSGQTVLTADDVDIDVVGEGDEGMEQDSDCESQCMQDRGDEVEEIEVKERSD--- 63

  Fly   649 STPQYSVSKNGANGYGNGNSNVNGSGAGSNTPQKQKHPNNVPYDPLVHTNNKPPYSFSSLIFMAI 713
                 |..::.|:|...|::..:.:|...|.|:..          ||    |||||:.:||.|||
Zfish    64 -----SPCESNADGETKGDAQESSTGPMQNKPKSS----------LV----KPPYSYIALITMAI 109

  Fly   714 EGSNEKALPVKEIYAWIVQHFPYFKTAPNGWKNSVRHNLSLNKSFVKVEKAP-NMGKGSLWRVEP 777
            ..|.:|.|.:..|..:|...|||::.....|:||:|||||||..|||:.:.| |.|||:.|.::|
Zfish   110 LQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDP 174

  Fly   778 Q 778
            |
Zfish   175 Q 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_001259311.1 Forkhead 700..785 CDD:278670 39/80 (49%)
foxd3NP_571365.2 Forkhead 96..182 CDD:278670 39/80 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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