Protein Alignment CHES-1-like and foxa1

DIOPT Version :10

• Sequence 1: NP_511071.3
• Gene: CHES-1-like / 31678
• FlyBaseID: FBgn0029504
• Length: 1268
• Species: Drosophila melanogaster
• Sequence 2: NP_571359.2
• Gene: foxa1 / 30541
• ZFINID: ZDB-GENE-990415-78
• Length: 427
• Species: Danio rerio
• Alignment Length: 495
• Identity: 130/495 - (26%)
• Similarity: 195/495 - (39%)
• Gaps: 127/495 - (25%)

  Fly   541 VASPETPPGAALLPG--------TYYATSTTSAGTTTTTLQARSLQLSVSPPP--PNMTPTSQVH 595
            |.||.|  .:::.||        :|...||  :|..|::    |..:|.:.|.  ..::|
Zfish    25 VYSPMT--NSSMNPGLSSMNNMNSYMGMST--SGNMTSS----SFNMSYANPALGAGLSP----- 76

  Fly   596 NGSLGG--GGGGGGGSGGGGGGGGANLRSPNSYASYDNEDSLKEFDLVVSSRLHTSTPQYSVSKN 658
             |::.|  .||...|.|||....|..| ||                    |.|:..|.|:| |.|
Zfish    77 -GTMAGMPTGGAMNGMGGGVSSMGTAL-SP--------------------SNLNAMTAQHS-SMN 118

  Fly   659 GANGYGNGNSNV--------NGSGAGSNTPQKQKHPNNVPYDPLVHTNNKPPYSFSSLIFMAIEG 715
            ..|.|.:.:..:        |.:.|..|...::.:|           :.|||||:.|||.|||:.
Zfish   119 ALNPYTSMSPTMSSMTYAQPNLNRARDNKTFRRSYP-----------HAKPPYSYISLITMAIQQ 172

  Fly   716 SNEKALPVKEIYAWIVQHFPYFKTAPNGWKNSVRHNLSLNKSFVKVEKAPNM-GKGSLWRVEPQQ 779
            :..|.|.:.|||.||:..|||::.....|:||:||:||.|..||||.::|:. ||||.|.:.|..
Zfish   173 APSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVSRSPDKPGKGSYWTLHPDS 237

  Fly   780 RQNLIQ---ALNRSPFFPNSAVDKISPSLKSPSGGSAYDSLDGGGSGSVSSAQPVAGGAGVPAAA 841
             .|:.:   .|.|...|   ..||..|..|...|.....|..|..:...:|::||...:....::
Zfish   238 -GNMFENGCYLRRQKRF---KCDKKLPDGKRSEGKREQSSGSGSPASDSTSSKPVHMDSSSITSS 298

  Fly   842 AVALSTPT------KSNGLALANGASQ----ATNAARPHSPNGGGSGSHARFDPYLFPNLSKAFR 896
            ..:.|.|:      .|....|.:|..|    :|:.:..|| ....|..|.:.||:...|...:..
Zfish   299 NQSSSPPSLDHRSGSSANSELKSGGPQVHPVSTSLSSLHS-MAHESQLHLKGDPHYSFNHPFSIN 362

  Fly   897 NIREDTVGQPMLQ-DALDDELSGDYHNNNNNNSGSKYNYMGANGSGGAGSGGVGSNANGASDGIN 960
            |:...:..|..|: .|.:..|              :|:..|:         |:.||...|
Zfish   363 NLMSSSEQQHKLELKAYEQAL--------------QYSSYGS---------GMSSNLPMA----- 399

  Fly   961 FARLARDCGADSIDDVHAAAAMLYLKHGPKIYSEPFQNGS 1000
                    |..|:|...|..|..|    ..:||.|..|.|
Zfish   400 --------GRASMDPSAALEASYY----QGVYSRPVLNTS 427

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CHES-1-like	NP_511071.3	FH_FOXN2-like	700..775	CDD:410805	39/75 (52%)
foxa1	NP_571359.2	Forkhead_N	17..156	CDD:369872	40/177 (23%)
		FH_FOXA1	145..255	CDD:410812	46/124 (37%)
		HNF_C	356..416	CDD:430552	18/99 (18%)