DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHES-1-like and Foxk1

DIOPT Version :10

Sequence 1:NP_511071.3 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_001032296.2 Gene:Foxk1 / 304298 RGDID:1309643 Length:719 Species:Rattus norvegicus


Alignment Length:638 Identity:156/638 - (24%)
Similarity:219/638 - (34%) Gaps:221/638 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   500 GQESPAVVTTTTLISAGTLP--PGYSFVNQVASTPHVLSTPAHVASPETPPGAALLPGTYYATST 562
            |::|.|    ..|::..:.|  |........|:.|...|.|.....|..||....:||.....||
  Rat     5 GEDSGA----RALLALRSAPCSPVLCAAAAAAAFPATASPPPPAQPPPGPPALPAVPGPEPVPST 65

  Fly   563 TSAGTTTTTLQARSLQLSV--SPPP----------------PNMTPTSQVHNGS----------- 598
            .:..|.|......:...||  ||.|                |::|.......||           
  Rat    66 AATATATAPALVAAAAASVRQSPGPALARLEGREFEFLMRQPSVTIGRNSSQGSVDLNMGLSSFI 130

  Fly   599 ------------------LGGGGGGGGGSGGGGGGGGANL------RSPNS-----YAS-YDNED 633
                              ||..|....|:....|.....|      |.|::     :.| |..|:
  Rat   131 SRRHLQLSFQEPHFYLRCLGKNGVFVDGAFQRRGAPALQLPQQCTFRFPSTAIKIQFTSLYHKEE 195

  Fly   634 S------------------LKEFDL-VVSSRLHTSTPQYSVSKN-GANGYGNGNS------NVNG 672
            :                  :.|.|| .:.|.:.:.|...||..: .|:..|.|:|      ||..
  Rat   196 APASPLRPLYPQISPLKIHIPEPDLRSLVSPIPSPTGTISVPNSCPASPRGAGSSSYRFVQNVTS 260

  Fly   673 --------SGAGSNTPQKQKHPNNVPYDPLVHTNNKPPYSFSSLIFMAIEGSNEKALPVKEIYAW 729
                    :...::..|......:.|.|     .:|||||::.||..||..:.::.|.:..|||.
  Rat   261 DLQLAAEFAAKAASEQQADTSGGDSPKD-----ESKPPYSYAQLIVQAISSAQDRQLTLSGIYAH 320

  Fly   730 IVQHFPYFKTAPNGWKNSVRHNLSLNKSFVKVEKA-PNMGKGSLWRVEPQQRQNLI-QALN---- 788
            |.:|:||::||..||:||:|||||||:.|:||.:: ...||||.||::|.....|: ||..    
  Rat   321 ITKHYPYYRTADKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQ 385

  Fly   789 ------RSPFFPNSA----VDKISPSLKSP--SGGSAYDSLDGGGS------------------- 822
                  |:||.|.|:    .....|.|.||  ||....:.|...||                   
  Rat   386 RGVSCFRTPFGPLSSRSAPASPTHPGLMSPRSSGLQTPECLSREGSPIPHDPDLGSKLASVPEYR 450

  Fly   823 ------GSVSSAQPVAGG-------------AGVPA-----------AAAVALSTPT-------- 849
                  ||..|||||...             |.:||           |..|....||        
  Rat   451 YSQSAPGSPVSAQPVIMAVPPRPSNLVAKPVAYMPASIVTSQQPSGHAIHVVQQAPTVTMVRVVT 515

  Fly   850 ----KSNGLALANGASQATNAARPHSPNGGG---SGSHAR---FDPYL-FPNLSKAFRNIREDTV 903
                .:||..||:..|.||:    |...|..   .|:.||   ..|.: |..:..|.|.|:  ||
  Rat   516 TSANSANGYILASQGSTATS----HDTAGTAVLDLGNEARGLEEKPTIAFATIPAASRVIQ--TV 574

  Fly   904 GQPM-----------LQDALDDELSGDYH--------NN-----NNNNSGSKY 932
            ...|           ||.|....: |.:|        |.     .||.:|:.|
  Rat   575 ASQMAPGVPGHTVTILQPATPVTI-GQHHLPVRAVTQNGKHAVPTNNLTGNAY 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_511071.3 FH_FOXN2-like 700..775 CDD:410805 38/75 (51%)
Foxk1NP_001032296.2 FHA_FOXK1 89..191 CDD:438774 14/101 (14%)
FH_FOXK1 289..389 CDD:410828 43/99 (43%)

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