DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHES-1-like and Foxh1

DIOPT Version :9

Sequence 1:NP_001259311.1 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:XP_008763787.1 Gene:Foxh1 / 300054 RGDID:1311275 Length:416 Species:Rattus norvegicus


Alignment Length:434 Identity:95/434 - (21%)
Similarity:145/434 - (33%) Gaps:137/434 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   618 ANLRSPNSYASYDNE-------DSLKEFDLVVSSRLHTSTPQYSVSKNGANGY-------GNGNS 668
            |:...|:.:...|.|       .....:||..:....|.:||  :.:..|.||       .|...
  Rat     7 ASFSHPSPFHQNDKERAWPPCPSMASGWDLASTYSPTTLSPQ--LVQALAQGYIPCMGPLDNSQL 69

  Fly   669 NVNGSGAGSNTPQKQKHPNNVPYDPLVHTNNKPPYSFSSLIFMAIEGSNEKALPVKEIYAWIVQH 733
            ....:.:.|.||:::|...      |.|  :||||::.::|          ||.::::.|    .
  Rat    70 RPPEAESLSKTPKRRKKRY------LRH--DKPPYTYLAMI----------ALIIRQVQA----V 112

  Fly   734 FPYFKTAPNGWKNSVRHNLSLNKSFVKVEKAP--NMGKGSLWRV-------EPQQRQNLI----- 784
            ||:|:....|||:|:|||||.|:.|.||.|.|  ...||:.|.|       |..:.||..     
  Rat   113 FPFFRDDYEGWKDSIRHNLSSNRCFRKVPKDPAKPQAKGNFWAVDVSLIPAEALRLQNTALCRRW 177

  Fly   785 ---------------QALNRSPFFPNSAVDKISPSLKSPSGGSAYDSLDGGGSGSVSSAQPVAGG 834
                           ..|:..|:.|.      ||...|....|....|...|..|.....|...|
  Rat   178 QNRGTHRAFAKDLSPYVLHGQPYRPP------SPPPPSREDFSIKSLLGDPGKASTWPQHPRLAG 236

  Fly   835 AGVPAAAAVALSTPTKSNGLALANGASQ----ATNAARPHSPNGGGS-GSHARFDPYLFPNLSKA 894
            ...||.|: .||...:..|...:|.:.:    .::..||....|..| |...|..|         
  Rat   237 QSTPAQAS-TLSKGEEGIGAGPSNVSDKPLWPLSSLPRPTRIEGETSQGEVIRPSP--------- 291

  Fly   895 FRNIREDTVGQP--MLQDALDDELSGDYHNNNNNNSGSKYNYMG--------------------- 936
               :..|....|  :|||:.|        :...:..||:.:..|                     
  Rat   292 ---VSSDQGSWPLHLLQDSSD--------SMGMSRRGSRASLWGQLPTSYLPIYTPNVVMPLATL 345

  Fly   937 -------ANGSGGAGSGGVGSNANGASDGINFARLARDCGADSI 973
                   ...|.......||:.:.|:.|.:        |..||:
  Rat   346 PPTSCPRCPSSASPAYWSVGTESQGSQDLL--------CDLDSL 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_001259311.1 Forkhead 700..785 CDD:278670 33/113 (29%)
Foxh1XP_008763787.1 FH 93..157 CDD:294049 29/77 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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