DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHES-1-like and Foxd3

DIOPT Version :9

Sequence 1:NP_001259311.1 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:XP_008762182.2 Gene:Foxd3 / 29203 RGDID:621715 Length:469 Species:Rattus norvegicus


Alignment Length:430 Identity:124/430 - (28%)
Similarity:160/430 - (37%) Gaps:86/430 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   598 SLGGGGGGGGGSG--------------GGGGGGGANLRSPNSYASYDN-----EDSLKEFD--LV 641
            :|.|.|.....||              |.|..|   |...:|.|..|:     :..|.|.|  |.
  Rat     2 TLSGSGSASDMSGQTVLTAEDVDIDVVGEGDDG---LEEKDSDAGCDSPAGPPDLRLDEADEGLP 63

  Fly   642 VSSRLHTSTPQYSVSKNGANGYGN--------------------GNSNVNGSGAGSNTPQKQKHP 686
            .|:....|.||.....:.|.|.||                    |.....|...|..||.|    
  Rat    64 ASAHHGQSQPQALALPSEATGPGNDTGAPEADGCKGGEDAVTGGGGPGAGGGATGGLTPNK---- 124

  Fly   687 NNVPYDPLVHTNNKPPYSFSSLIFMAIEGSNEKALPVKEIYAWIVQHFPYFKTAPNGWKNSVRHN 751
               |.:.||    |||||:.:||.|||..|.:|.|.:..|..:|...|||::.....|:||:|||
  Rat   125 ---PKNSLV----KPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHN 182

  Fly   752 LSLNKSFVKVEKAP-NMGKGSLWRVEPQQRQNLIQA--LNRSPFFPNSAVDKI--SPSLKSPSGG 811
            ||||..|||:.:.| |.|||:.|.::||........  |.|...|.....:.:  ..:|...|.|
  Rat   183 LSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLREQTALMMQSFG 247

  Fly   812 SAYDSLDGGGSGSVSSAQPVAGGAGV-PAAAAVALSTPTKSNGLALANGASQATNA--------- 866
             || ||     .:.:||.|.....|: |||||.|.|.|..: ..|.|..|.|...|         
  Rat   248 -AY-SL-----AAAASAGPYGRPYGLHPAAAAGAYSHPAAA-AAAAAAAALQYPYALPPVAPVLP 304

  Fly   867 -ARPHSPNGGGSGSHARFDPYLFPNLSKAFRNI-----REDTVGQPMLQDALDDELSG--DYHNN 923
             |.|..|:|......|.|...|.|:|......:     ...|.|.......:..|.|.  .:...
  Rat   305 PAVPLLPSGELGRKAAAFGSQLGPSLQLQLNTLGAAAAAAGTAGAAGTTSLIKSEPSARPSFSIE 369

  Fly   924 NNNNSGSKYNYMGANGSGGAGSGGVGSNANGASDGINFAR 963
            |...:|.......|.|.|.||..|.|..:.|.....:|.|
  Rat   370 NIIGAGPAAPGSSAGGGGSAGGAGGGGGSGGGGSAQSFLR 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_001259311.1 Forkhead 700..785 CDD:278670 39/85 (46%)
Foxd3XP_008762182.2 FH_FOXD3 130..226 CDD:410821 42/99 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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