Protein Alignment CHES-1-like and Foxn1

DIOPT Version :10

• Sequence 1: NP_511071.3
• Gene: CHES-1-like / 31678
• FlyBaseID: FBgn0029504
• Length: 1268
• Species: Drosophila melanogaster
• Sequence 2: NP_001094118.2
• Gene: Foxn1 / 287469
• RGDID: 3970
• Length: 648
• Species: Rattus norvegicus
• Alignment Length: 495
• Identity: 124/495 - (25%)
• Similarity: 168/495 - (33%)
• Gaps: 177/495 - (35%)

  Fly   538 PAHVASPETPPGAALLPGTYYATSTTSAGTTTTTLQARSLQLSVSPP---------------PPN 587
            |.|  |..|.||:..|.|.          .....:||..|..|.:|.               ||.
  Rat     6 PPH--SDVTLPGSTRLEGE----------PQGDLMQAPGLPGSPAPQNKHANFSCSSFVPDGPPE 58

  Fly   588 MTPTSQVHNGSLGGGG----------GGGGGS---------------GGGGGGGGANLRSP---- 623
            ..|:...|:.|:...|          |.|.||               .|..|..|..||..
  Rat    59 RAPSLPPHSPSVASPGPEQIQSHCTAGPGPGSFRLSPSDKYPGFGFEEGPAGSPGRFLRGNHMPF 123

  Fly   624 NSYASYDNEDSLKEFDLVVSSRLHTSTPQYSVS-----------------KNGANGYGNG----- 666
            :.|..:.:||...|....::...|:...|.::.                 ...|..:.||
  Rat   124 HPYKGHFHEDIFSEAQTAMALDGHSFKTQGALEAFEEIPVDVGDAEAFLPSFPAEAWCNGLPYPS 188

  Fly   667 --------NSNV--------NGSG------------------------AGSNTPQKQKHPNNVPY 691
                    .|.|        ||.|                        .|.:.|.......:.||
  Rat   189 QEHNQVLQGSEVKVKPQALDNGPGMYCYQPPLQHVYCSSQPTFHQYSPGGGSYPVPYLGSTHYPY 253

  Fly   692 DPLVHTNN---------KPPYSFSSLIFMAIEGSNEKALPVKEIYAWIVQHFPYFKTAPNGWKNS 747
            ..:....|         ||.||:|.|||||::.|...:|||.|||.::.:|||||||||:|||||
  Rat   254 QRIAPQANADGHQPLFPKPIYSYSILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAPDGWKNS 318

  Fly   748 VRHNLSLNKSFVKVE--KAPNMGKGSLWRVEPQQRQNLIQALNRSPFFPNSAVDKISPSL----- 805
            |||||||||.|.|||  ...:..||.||.:.|                  |.:||:...|
  Rat   319 VRHNLSLNKCFEKVENKSGSSSRKGCLWALNP------------------SKIDKMQEELQKWKR 365

  Fly   806 -------KSPSGGSAYDSLDGG-----GSGSVSSAQPVAGGAGV--PAAAAVALSTPTKSNGLAL 856
                   ||.:.....|||.|.     ||..:....|...|.|.  |.|.:..|:.|.  :.:..
  Rat   366 KDPIAVRKSMAKPEELDSLIGDKREKLGSPLLGCPPPGLAGPGPIRPLAPSAGLTQPL--HPMHP 428

  Fly   857 ANGASQATNAARP----HSPNGGGSGSHARFDPYLFPNLS 892
            |.|.....|..:.    |:|:     .:.:..|:|.|:|:
  Rat   429 APGPMPGKNPLQDLLGGHAPS-----CYGQTYPHLSPSLA 463

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CHES-1-like	NP_511071.3	FH_FOXN2-like	700..775	CDD:410805	48/76 (63%)
Foxn1	NP_001094118.2	FH_FOXN1	270..366	CDD:410830	53/113 (47%)