DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CHES-1-like and Foxj3

DIOPT Version :9

Sequence 1:NP_001259311.1 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_001344106.1 Gene:Foxj3 / 230700 MGIID:2443432 Length:623 Species:Mus musculus


Alignment Length:553 Identity:126/553 - (22%)
Similarity:204/553 - (36%) Gaps:171/553 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   632 EDSLKEFDLVVSSRLHTSTPQYSVSKNGA--NGYGNGNSNVNGSGAGSNTPQKQKHPNNVPYDPL 694
            |.||...|.     |...|.:.::.|:.|  |.:|.|.|..|.. ...||...|:....      
Mouse    21 ESSLTSMDW-----LPQLTMRAAIQKSDATQNAHGTGISKKNAL-LDPNTTLDQEEVQQ------ 73

  Fly   695 VHTNNKPPYSFSSLIFMAIEGSNEKALPVKEIYAWIVQHFPYFKTAPNGWKNSVRHNLSLNKSFV 759
             |.:.|||||::|||..||..|.:|.:.:.|||.||..:|||::.|.:|||||:||||||||.|:
Mouse    74 -HKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFL 137

  Fly   760 KVEKA-PNMGKGSLWRVEPQQRQNLIQALNRSPFFPNSAVDKISPSLKSPSGGSAYDSLDGGGSG 823
            ||.:: .:.||||.|.::...:::.:      |..|.    |.:.|::..|...:.|| |..|..
Mouse   138 KVPRSKDDPGKGSYWAIDTNPKEDTL------PTRPK----KRARSVERASTPYSIDS-DSLGME 191

  Fly   824 SVSSAQPVAGGAGVPAAAAVALSTPTKSNGLALANGASQATNAARPHSPNGGGSGSHARFDPYLF 888
            .:.|..         |:..:|::|.|  |.:.|.|.....:::.|....|               
Mouse   192 CIISGS---------ASPTLAINTVT--NKVTLYNADQDGSDSPRSSLNN--------------- 230

  Fly   889 PNLS-KAFRNIREDTVG------------QPMLQDALDDELSGDYHNNNNNNSG---SKYNYMGA 937
             :|| ::..::..::||            :|:.|.....:.....:|.......   ::||:   
Mouse   231 -SLSDQSLASVNLNSVGSVHSYTPVTNHPEPVSQPLTPQQQQQPQYNLPEREKQLLFTEYNF--- 291

  Fly   938 NGSGGAGSGGVGSNANGASDGINFARLARDCGADSIDDVHAAAAMLYLKHGPKIYSEPF-QNGSG 1001
                                                :|:.|:...||    ..::.:.. |.|..
Mouse   292 ------------------------------------EDLSASFRSLY----KSVFEQSLSQQGLM 316

  Fly  1002 PVITSSPSEDHTYSAGGNSNADSGSSTPLTNGNALASVAQAVAQGQNNQGGAGSDSNCASSDAAY 1066
            .:.:.|..:.||..:..:|.:.:.:|.|.:|.::|          .||..|              
Mouse   317 SIPSESSQQSHTSCSYQHSPSSTVTSHPHSNQSSL----------PNNHSG-------------- 357

  Fly  1067 DSSEENHNITPEEMADRQRHRDGVDALLSLSGSSIVECGSVATTHYHSNGSSGS---SHGSP-HK 1127
                                       ||.:||:.|...|::....|...|..:   .||.| |.
Mouse   358 ---------------------------LSATGSNSVAQVSLSHPQMHPQPSPHTPHRPHGLPQHP 395

  Fly  1128 RASSHSLEEEHLQQHREQQLQQQQQQQQHHHQQ 1160
            :...|  ...|.|||.:.|....|....|.|.|
Mouse   396 QRPQH--PAPHPQQHSQLQPPHSQHPPPHQHIQ 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_001259311.1 Forkhead 700..785 CDD:278670 42/85 (49%)
Foxj3NP_001344106.1 COG5025 <54..347 CDD:227358 88/381 (23%)
Forkhead 78..155 CDD:365978 42/76 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 143..178 9/44 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 248..275 2/26 (8%)
PAT1 <311..>434 CDD:370676 35/169 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 316..451 33/164 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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