DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHES-1-like and Foxc2

DIOPT Version :10

Sequence 1:NP_511071.3 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_001095150.1 Gene:Foxc2 / 171356 RGDID:621703 Length:494 Species:Rattus norvegicus


Alignment Length:638 Identity:152/638 - (23%)
Similarity:209/638 - (32%) Gaps:222/638 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   652 QYSVSKNGANG----------------YG---------NGNSNVNGSGAG-SNTPQKQKHPNNVP 690
            :||||...|.|                ||         :|:....|:|.| |..|  ..|....|
  Rat     4 RYSVSDPNALGVVPYLSEQNYYRAAGSYGGMASPMGVYSGHPEQYGAGMGRSYAP--YHHQPAAP 66

  Fly   691 YDPLVHTNNKPPYSFSSLIFMAIEGSNEKALPVKEIYAWIVQHFPYFKTAPNGWKNSVRHNLSLN 755
            .| ||    |||||:.:||.|||:.:.||.:.:..||.:|:..||:::....||:||:|||||||
  Rat    67 KD-LV----KPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLN 126

  Fly   756 KSFVKV---EKAPNMGKGSLWRVEPQQRQNLIQ---ALNRSPFFPNSAVDKISPS---LKSPSGG 811
            :.||||   :|.|  ||||.|.::|.. .|:.:   .|.|...|....|.|....   ||.|...
  Rat   127 ECFVKVPRDDKKP--GKGSYWTLDPDS-YNMFENGSFLRRRRRFKKKDVPKDKEERAHLKEPPPA 188

  Fly   812 SAYDSLDGGGSGSVSSAQPVAGGAGVP-----------AAAAVALSTPTKSNGLALANGASQATN 865
            ||    .|..:|:     |||.|   |           .||:.||...||...|: ..||.||:.
  Rat   189 SA----KGAPTGT-----PVADG---PKEAEKKVVVKSEAASPALPVITKVETLS-PEGALQASP 240

  Fly   866 AARPHSPNGGGSGS---HARFDPYLFPNLS-KAFRNIREDTVGQPMLQDALDDELSGDYHNNNNN 926
            .:...:|.|...||   |....|...|..| :....:|....|             ||.      
  Rat   241 RSSASTPAGSPDGSLPEHHAAAPNGLPGFSVETIMTLRTSPPG-------------GDL------ 286

  Fly   927 NSGSKYNYMGANGSGGAGSGGVGSNANGASDGINFARLARDCGADSIDDVHAAAAMLYLKHGPKI 991
                         |..|...|:                           |....|:.|....|..
  Rat   287 -------------SPAAARAGL---------------------------VVPPLALPYAAAPPAA 311

  Fly   992 YSEPFQNGSGPVITSSPSEDHTYSAGGNSNADSGSSTPLTNGNALASVAQAVAQGQNNQGGAGSD 1056
            |::|                                               .|||....|.||..
  Rat   312 YAQP-----------------------------------------------CAQGLEAAGSAGYQ 329

  Fly  1057 SNCASSDAAYDSSEENHNITP----EEMADRQRHRDGVDALLSLSGSSIVECGSVATTHYHSNGS 1117
            .:..:......:....|...|    |.::|   |..|..:.|.....:..:.|::        |:
  Rat   330 CSMRAMSLYTGAERPAHVCVPPALDEALSD---HPSGPGSPLGALNLAAGQEGAL--------GA 383

  Fly  1118 SGSSHGSPHKRASSHSLEEEHLQQHREQQLQQQQQQQQHHHQQFGSSQAVYTNGSGSKMALLSSA 1182
            ||..|       ..||        |...|......|.....|....:.:.|.|..|.    ||..
  Rat   384 SGHHH-------QHHS--------HLHPQAPPPAPQPPPAPQPATQATSWYLNHGGD----LSHL 429

  Fly  1183 AANVALAQQQQQQIHQDMYSSTAGHNASMYLGGLNSHCLSGGGGVGVAAGMLP 1235
            ..:....|||.....::|::|   |..     ||::..| |...|..|:..||
  Rat   430 PGHTFATQQQTFPNVREMFNS---HRL-----GLDNSTL-GESQVSNASCQLP 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_511071.3 FH_FOXN2-like 700..775 CDD:410805 39/77 (51%)
Foxc2NP_001095150.1 FH_FOXC1 66..158 CDD:410818 45/99 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..213 15/58 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 233..267 10/33 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 380..422 11/64 (17%)

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