DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHES-1-like and Foxa3

DIOPT Version :10

Sequence 1:NP_511071.3 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_032286.1 Gene:Foxa3 / 15377 MGIID:1347477 Length:353 Species:Mus musculus


Alignment Length:409 Identity:112/409 - (27%)
Similarity:147/409 - (35%) Gaps:129/409 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   522 YSFVNQVAS--------TPHVLSTPAHVASPETPPGAALLPGTYYATSTTSAGTTTTTLQARSLQ 578
            ||.||.|.:        |.:.||:|       .|||.                     |||..|.
Mouse    25 YSPVNPVPTMAPLNSYMTLNPLSSP-------YPPGG---------------------LQASPLP 61

  Fly   579 LS-VSPPPPN--MTPTSQVHNGSLGGGGGGGGGSGGGGGGGGANLRSPNSYASYDNEDSLKEFDL 640
            .. ::||.|.  :.||..    |||.||..||.:.|....|                        
Mouse    62 TGPLAPPAPTAPLGPTFP----SLGTGGSTGGSASGYVAPG------------------------ 98

  Fly   641 VVSSRLHTSTPQYSVSKNGANGYGNGNSNVNGSGAGSNTPQKQKHPNNVPYDPLVHTNNKPPYSF 705
                      |.....|..|.||..                           ||.|.  |||||:
Mouse    99 ----------PGLVHGKEMAKGYRR---------------------------PLAHA--KPPYSY 124

  Fly   706 SSLIFMAIEGSNEKALPVKEIYAWIVQHFPYFKTAPNGWKNSVRHNLSLNKSFVKVEKAPNM-GK 769
            .|||.|||:.:..|.|.:.|||.||:..|||::.....|:||:||:||.|..||||.::|:. ||
Mouse   125 ISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGK 189

  Fly   770 GSLWRVEPQQRQNLIQ---ALNRSPFFPNSAVDKISPSLKSPSGGSAYDSLDGGGSGSVSSAQPV 831
            ||.|.:.|.. .|:.:   .|.|...|      |:..  |:..|.||..:...|.:||.:||...
Mouse   190 GSYWALHPSS-GNMFENGCYLRRQKRF------KLEE--KAKKGNSATSASRNGTAGSATSATTT 245

  Fly   832 AGGAGVPAAAAVALSTPTKSNGLALANGASQATNAARPHSPNGGGSG----SHARFD-PYLFPNL 891
            |    ..|..:.|...||.|...|.:.......:.|.|.|.....||    ...:.| ||.| |.
Mouse   246 A----ATAVTSPAQPQPTPSEPEAQSGDDVGGLDCASPPSSTPYFSGLELPGELKLDAPYNF-NH 305

  Fly   892 SKAFRNIREDTVGQPMLQD 910
            ..:..|:..:....|...|
Mouse   306 PFSINNLMSEQTSTPSKLD 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_511071.3 FH_FOXN2-like 700..775 CDD:410805 39/75 (52%)
Foxa3NP_032286.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 52..83 13/55 (24%)
FH_FOXA3 117..218 CDD:410814 46/109 (42%)
COG5025 <118..323 CDD:227358 73/220 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..287 19/73 (26%)

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