DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CHES-1-like and Foxg1

DIOPT Version :10

Sequence 1:NP_511071.3 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_032267.1 Gene:Foxg1 / 15228 MGIID:1347464 Length:481 Species:Mus musculus


Alignment Length:567 Identity:132/567 - (23%)
Similarity:197/567 - (34%) Gaps:200/567 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   461 VPKTSSF---STVFEAVNYATSAASNSSSSSNSTPNSQAILHGQESPAVVTTTTLISAGTLPPGY 522
            :|| |||   |.|.|||......||:...:|:...:.....|....|              ||  
Mouse    13 IPK-SSFSINSLVPEAVQNDNHHASHGHHNSHHPQHHHHHHHHHHPP--------------PP-- 60

  Fly   523 SFVNQVASTPHVLSTPAHVASPETPPGAALLPGTYYATSTTSAGTTTTTLQARSLQLSVSP--PP 585
                  |..|   ..|......:.||.|...|                  |||....:...  |.
Mouse    61 ------APQP---PPPPPQQQQQQPPPAPQPP------------------QARGAPAADDDKGPQ 98

  Fly   586 PNMTPTSQVHNGSLGGGGGGGGGSGGGGGGGGANLRSPNSYASYDNEDSLKEFDLVVSSRLHTST 650
            |.:.|.|...:|:.....|..|..|||          |...|....::..|              
Mouse    99 PLLLPPSTALDGAKADALGAKGEPGGG----------PAELAPVGPDEKEK-------------- 139

  Fly   651 PQYSVSKNGANGYGNGNSNVNGSGAGSNTPQ--KQKHPNNVPYDPLVHTNNKPPYSFSSLIFMAI 713
                       |.|.|.....|:|.|....:  |:....|..|:       |||:|:::||.|||
Mouse   140 -----------GAGAGGEEKKGAGEGGKDGEGGKEGDKKNGKYE-------KPPFSYNALIMMAI 186

  Fly   714 EGSNEKALPVKEIYAWIVQHFPYFKTAPNGWKNSVRHNLSLNKSFVKVEK-APNMGKGSLWRVEP 777
            ..|.||.|.:..||.:|:::|||::....||:||:||||||||.||||.: ..:.|||:.|.::|
Mouse   187 RQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDP 251

  Fly   778 --------------QQRQNLIQA-----------------LNR--SPFFPNSAVDKISP--SLKS 807
                          ::|....:|                 ::|  |.::|      :||  ||..
Mouse   252 SSDDVFIGGTTGKLRRRSTTSRAKLAFKRGARLTSTGLTFMDRAGSLYWP------MSPFLSLHH 310

  Fly   808 PSGGSAYDSLDGGGSGSVSSAQPVAGGAGVPAAAAVALSTPTKSNGLALANGAS--QATNAARPH 870
            |...|   :|...|:.|...:.|      :|.::.:..::...::..:.|||.|  :..|...|:
Mouse   311 PRASS---TLSYNGTTSAYPSHP------MPYSSVLTQNSLGNNHSFSTANGLSVDRLVNGEIPY 366

  Fly   871 S-------------PNGGG---SGSHARFDP-----------YLFPNL-----------SKAFRN 897
            :             |.|..   ||::: .:|           |.||::           |.:.|.
Mouse   367 ATHHLTAAALAASVPCGLSVPCSGTYS-LNPCSVNLLAGQTSYFFPHVPHPSMTSQTSTSMSARA 430

  Fly   898 IREDTVGQ--------------PMLQDALDDELSGDYHNNNNNNSGS 930
            ....|..|              |.....|...|| ||..:.|..|.|
Mouse   431 ASSSTSPQAPSTLPCESLRPSLPSFTTGLSGGLS-DYFTHQNQGSSS 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_511071.3 FH_FOXN2-like 700..775 CDD:410805 39/75 (52%)
Foxg1NP_032267.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..173 39/226 (17%)
FH_FOXG 173..251 CDD:410795 39/77 (51%)
COG5025 <176..>348 CDD:227358 53/186 (28%)
Required for interaction with TLE6. /evidence=ECO:0000269|PubMed:16314515 241..336 21/109 (19%)
Interaction with KDM5B. /evidence=ECO:0000250 375..398 5/23 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 419..447 4/27 (15%)

Return to query results.
Submit another query.