DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHES-1-like and Foxd3

DIOPT Version :9

Sequence 1:NP_001259311.1 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_034555.3 Gene:Foxd3 / 15221 MGIID:1347473 Length:469 Species:Mus musculus


Alignment Length:547 Identity:141/547 - (25%)
Similarity:179/547 - (32%) Gaps:165/547 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   443 SVSGSGSSTAAVNGGNSPVPKTSSFSTVFEAVNYATSAASNSSSSSNSTPNSQAILHGQESPAVV 507
            ::|||||::            ..|..||..|.:............... .:|.|   |.:|||..
Mouse     2 TLSGSGSAS------------DMSGQTVLTAEDVDIDVVGEGDDGLEE-KDSDA---GCDSPAGP 50

  Fly   508 TTTTLISAGTLPPGYSFVNQVASTPHVLSTPAHVASPETPPGAALLPGTYYATSTTSAGTTTTTL 572
            ....|..|...||        .|..|..|.|..:|.|               |..|..|..|...
Mouse    51 PDLRLDEADEGPP--------VSAHHGQSQPQALALP---------------TEATGPGNDTGAP 92

  Fly   573 QARSLQLSVSPPPPNMTPTSQVHNGSLGGGGGGGGGSGGGGGGGGANLRSPNSYASYDNEDSLKE 637
            :|                          .|..||..:..||||.||                   
Mouse    93 EA--------------------------DGCKGGEDAVTGGGGPGA------------------- 112

  Fly   638 FDLVVSSRLHTSTPQYSVSKNGANGYGNGNSNVNGSGA-GSNTPQKQKHPNNVPYDPLVHTNNKP 701
                                              |||| |..||.|       |.:.||    ||
Mouse   113 ----------------------------------GSGATGGLTPNK-------PKNSLV----KP 132

  Fly   702 PYSFSSLIFMAIEGSNEKALPVKEIYAWIVQHFPYFKTAPNGWKNSVRHNLSLNKSFVKVEKAP- 765
            |||:.:||.|||..|.:|.|.:..|..:|...|||::.....|:||:|||||||..|||:.:.| 
Mouse   133 PYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPG 197

  Fly   766 NMGKGSLWRVEPQQRQNLIQA--LNRSPFFPNSAVDKI--SPSLKSPSGGSAYDSLDGGGSGSVS 826
            |.|||:.|.::||........  |.|...|.....:.:  ..:|...|.| ||......|:|   
Mouse   198 NPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLREQTALMMQSFG-AYSLAAAAGAG--- 258

  Fly   827 SAQPVAGGAGV-PAAAAVALSTPTKSNGLALANGASQATNA----------ARPHSPNGGGSGSH 880
               |.....|: |||||.|.|.|..: ..|.|..|.|...|          |.|..|:|......
Mouse   259 ---PYGRPYGLHPAAAAGAYSHPAAA-AAAAAAAALQYPYALPPVAPVLPPAVPLLPSGELGRKA 319

  Fly   881 ARFDPYLFPNLSKAFRNI-----REDTVGQPMLQDALDDELSG----DYHNNNNNNSGSKYNYMG 936
            |.|...|.|:|......:     ...|.|.......:..|.|.    ...|.....|.:.....|
Mouse   320 AAFGSQLGPSLQLQLNTLGAAAAAAGTAGAAGTTSLIKSEPSARPSFSIENIIGAGSAAPGGSAG 384

  Fly   937 ANGSGGAGSGGVGSNANGASDGINFAR 963
            ..||||...||.||...|.:.  :|.|
Mouse   385 GGGSGGGAGGGGGSGGGGGAQ--SFLR 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_001259311.1 Forkhead 700..785 CDD:278670 39/85 (46%)
Foxd3NP_034555.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..127 48/249 (19%)
Forkhead 131..217 CDD:278670 39/85 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 379..409 11/31 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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