DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CHES-1-like and LOC101730723

DIOPT Version :9

Sequence 1:NP_001259311.1 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:XP_031760018.1 Gene:LOC101730723 / 101730723 -ID:- Length:337 Species:Xenopus tropicalis


Alignment Length:176 Identity:54/176 - (30%)
Similarity:76/176 - (43%) Gaps:30/176 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   642 VSSRLHTSTPQY------SVSKNGANGYGNGNS---NVNGSGAGSNTP-------QKQKHPNNVP 690
            :|..||...|.:      |:.|..|....|..:   :..|...|...|       :|:|..:...
 Frog     1 MSFGLHPWDPAFLPPQPPSMEKKSAPAAANRATLPPSPKGDSEGPREPDSSADWKKKKKKKSYQR 65

  Fly   691 YDPLVHTNNKPPYSFSSLIFMAIEGSNEKALPVKEIYAWIVQHFPYFKTAPNGWKNSVRHNLSLN 755
            |       .|||||:.::|.:.|:...||.|.:.:|...|...||:||....|||:|:|||||.|
 Frog    66 Y-------AKPPYSYLAMIALVIQNCPEKRLKLSQILQDISSLFPFFKGNYQGWKDSIRHNLSSN 123

  Fly   756 KSFVKVEKAP--NMGKGSLW-----RVEPQQRQNLIQALNRSPFFP 794
            ..|.||.|.|  ...||:.|     |:.|...:....|:.|...||
 Frog   124 DCFRKVLKDPLKPQAKGNYWTVDVTRIPPDALKLQNTAVTRQDLFP 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_001259311.1 Forkhead 700..785 CDD:278670 36/91 (40%)
LOC101730723XP_031760018.1 COG5025 66..>322 CDD:227358 41/111 (37%)
FH_FOXH 68..146 CDD:410796 34/77 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.