DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHES-1-like and foxe3

DIOPT Version :9

Sequence 1:NP_001259311.1 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:XP_002931457.1 Gene:foxe3 / 100495102 XenbaseID:XB-GENE-480592 Length:398 Species:Xenopus tropicalis


Alignment Length:429 Identity:94/429 - (21%)
Similarity:156/429 - (36%) Gaps:117/429 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   648 TSTPQYSVSKNGANGYGNGNSNVNGSGAGSNTPQKQKHPNNVPYDPLVHTNNKPPYSFSSLIFMA 712
            |.:|:     .|.||..:.::..:|.       :::|.|..         ..|||||:.:||.||
 Frog    51 TCSPE-----EGVNGLPDEHNQASGG-------RRRKRPIQ---------RGKPPYSYIALIAMA 94

  Fly   713 IEGSNEKALPVKEIYAWIVQHFPYFKTAPNGWKNSVRHNLSLNKSFVKVEKAP-NMGKGSLWRVE 776
            |..|.|:.|.:..||.:|::.||:::.....|:||:||||:||..|||:.:.| :.|||:.|.::
 Frog    95 IANSPERKLTLGGIYKFIMERFPFYRENSKKWQNSIRHNLTLNDCFVKIPREPGHPGKGNYWTLD 159

  Fly   777 P------------QQRQNLIQA-LNRSP-FFPNSAVDKISPSLKSPSGGSAYDSLDGGGSGSVSS 827
            |            ::|:...:. |...| :..||:....:|:.::....|.|.|:..|.:..:  
 Frog   160 PAAEDMFDNGSFLRRRKRFKRTDLTTYPGYMQNSSAFTPTPAGRASYPTSIYSSVGSGYNPQI-- 222

  Fly   828 AQPVAGGAGVPAAAAVALSTPTKSNGLALANGASQATNAARPH---SPNGGGSGSHARFDPYLFP 889
                                             .|..:.|..|   .|.|.|.|.|..|......
 Frog   223 ---------------------------------HQTHHPAMVHHYQPPGGAGQGQHRMFSIDSLI 254

  Fly   890 NLSKAFRNIREDTVGQPMLQDALDDELSGDYHNNNNNNSGSKYNYMGANGSGGAGSGGVGSNANG 954
            |.    :::.:.:.|..:...:|.  |:||.   .|..|......:....:......||||..|.
 Frog   255 NQ----QSVMQPSPGAELTHHSLG--LNGDL---GNMTSSCSVGDLSCFQTQSISPTGVGSLLNR 310

  Fly   955 ASDGINFARLARDCGADSIDDVHAAAAMLYLKHGPKIYSEPFQNGSGPVITSSPSEDHTYSAGGN 1019
            .|:.:                   ::.:.|      .||....:.|.|..:.||:....|.....
 Frog   311 PSNAV-------------------SSNLTY------SYSSSPPHLSVPPASYSPNNSQLYGPSSR 350

  Fly  1020 SNADSGS---------STPLTNGNALASVAQAVAQGQNN 1049
            ....|||         |.|.|..|.:.....:....|.|
 Frog   351 LAMRSGSCVDHTDQLLSLPGTQMNGVCQYNNSSYMRQTN 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_001259311.1 Forkhead 700..785 CDD:278670 37/97 (38%)
foxe3XP_002931457.1 FH 82..170 CDD:214627 36/87 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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