DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHES-1-like and foxl2

DIOPT Version :10

Sequence 1:NP_511071.3 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:XP_004917868.1 Gene:foxl2 / 100486124 XenbaseID:XB-GENE-486612 Length:326 Species:Xenopus tropicalis


Alignment Length:307 Identity:86/307 - (28%)
Similarity:125/307 - (40%) Gaps:81/307 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   622 SPNSYASYDNEDSLKEFDLVVSSRLHTSTPQYSVSKNGANGYGNGNSNVNGSGAGSNTPQKQKHP 686
            ||..|......|.:..|.         |..|.:|:....|  .|||.....|.......:.|:.|
 Frog    12 SPGCYCLNQGSDRMASFQ---------SPEQGTVALMTHN--SNGNKEAERSKEDLLPEKGQEKP 65

  Fly   687 NNVPYDPLVHTNNKPPYSFSSLIFMAIEGSNEKALPVKEIYAWIVQHFPYFKTAPNGWKNSVRHN 751
                 ||    :.|||||:.:||.|||..|.||.|.:..||.:|:..||:::....||:||:|||
 Frog    66 -----DP----SQKPPYSYVALIAMAIRESAEKRLTLSAIYQYIISKFPFYEKNKKGWQNSIRHN 121

  Fly   752 LSLNKSFVKVEKAPNMG----KGSLWRVEP-----------QQRQNLIQALNRSP--------FF 793
            ||||:.|:||   |..|    ||:.|.::|           ::|:.:.:.....|        .|
 Frog   122 LSLNECFIKV---PREGGGERKGNYWTLDPACEDMFEKGNYRRRRRMKRPFRPPPTHFQAGKSLF 183

  Fly   794 PNSAVDKISP-------------SLKSPSGGSAYDSLDGGGSGSVSSAQPV------AGGAGVPA 839
            .:.....:||             .|..|....:|.|....| |:||   ||      |..:..|.
 Frog   184 SSDTYGYLSPPKYLQSTFMNNSWPLAQPPAPMSYTSCQMAG-GNVS---PVNVKGLSASSSYSPY 244

  Fly   840 AAAVALSTPT---KSNGLA-----LANGASQATNA----ARPHSPNG 874
            :...::|.|:   ..||::     .|:.|.|.:.|    |.|..|||
 Frog   245 SRVQSMSLPSMVNSYNGMSHHHHPHAHHAQQLSPASPAPAPPAPPNG 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_511071.3 FH_FOXN2-like 700..775 CDD:410805 38/78 (49%)
foxl2XP_004917868.1 FH_FOXL2 70..158 CDD:410802 39/90 (43%)

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