DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHES-1-like and foxl1

DIOPT Version :10

Sequence 1:NP_511071.3 Gene:CHES-1-like / 31678 FlyBaseID:FBgn0029504 Length:1268 Species:Drosophila melanogaster
Sequence 2:XP_012817795.1 Gene:foxl1 / 100038263 XenbaseID:XB-GENE-5880620 Length:406 Species:Xenopus tropicalis


Alignment Length:492 Identity:110/492 - (22%)
Similarity:163/492 - (33%) Gaps:189/492 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   642 VSSRLHTSTPQYSVSKNGANGYGNGNSNVNGSG-AGSNTPQKQKHPNNVPYDPLVHTNNKPPYSF 705
            :.|.||.|...|.        ||...:.|...| |.:|...:|:.|            .|||||:
 Frog    12 LGSDLHRSPLVYL--------YGAERALVPALGFASTNVISRQEPP------------QKPPYSY 56

  Fly   706 SSLIFMAIEGSNEKALPVKEIYAWIVQHFPYFKTAPNGWKNSVRHNLSLNKSFVKVEKAPNM-GK 769
            .:||.|||:.|.:..:.:..||.:|:..||::.....||:||:|||||||..|:||.:.... ||
 Frog    57 IALIAMAIKDSPDHRVTLNGIYQFIMDRFPFYHDNKQGWQNSIRHNLSLNDCFIKVPREKGRPGK 121

  Fly   770 GSLWRVEPQ-----QRQNLIQALNRSPFFPNSAVDKISPSL-----KSPSGGSAYDSLDGGGSGS 824
            ||.|.::|:     :..| .:...|.|          .|.|     :..:..:.|...|....|:
 Frog   122 GSYWTLDPKCLDMFENGN-FRRRKRKP----------KPILCQEGKRHKAEAAEYRLADAACKGT 175

  Fly   825 VSSAQPVAGGAGVPAAAAVALSTPTKSNGLALANGASQATNAARPHSPNGGGSGSHARFDPYLFP 889
            ...   |||..|                    .||:..|....:|.|.                 
 Frog   176 TCK---VAGNTG--------------------QNGSQDAPLGRKPTSA----------------- 200

  Fly   890 NLSKAFRNIREDTVGQPMLQDALDDELSGDY--------HNNNNNNSGSKYNYMGANGSGGAGSG 946
                    ..:|:.|:  :..:.|:..||||        .:|....||:.:|             
 Frog   201 --------CEKDSAGE--MSSSEDEGGSGDYIKTSPAPECHNQERTSGTYWN------------- 242

  Fly   947 GVGSNANGASDGINFARLARDCGADSIDDVHAAAAMLYLKHGPKIY-SEPFQNGSGPVITSSPSE 1010
                                        .:|           |..| |.|..  |..|..||..|
 Frog   243 ----------------------------SLH-----------PSFYVSVPLL--SDQVTLSSKRE 266

  Fly  1011 DHTYSAGGNSNADSGSSTPLTNGNALASVAQ----AVAQGQNNQGGAGSDSNCASSDAAYDSSEE 1071
                          ||.........||..||    |.:.|.||:....:|:||..:         
 Frog   267 --------------GSQAHEQGNRLLACGAQGHLGAPSPGSNNEKAGATDANCKEA--------- 308

  Fly  1072 NHNITPEEMADRQRHRDGVDALLSLSGSSIVECGSVA 1108
                  |:::.:......:|::||.|..|..|||:.|
 Frog   309 ------EQLSQKSARSFSIDSILSRSDQSAPECGAPA 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHES-1-likeNP_511071.3 FH_FOXN2-like 700..775 CDD:410805 35/75 (47%)
foxl1XP_012817795.1 FH_FOXL1 49..146 CDD:410801 38/109 (35%)

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