DRSC/TRiP Functional Genomics Resources

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Protein Alignment rumpel and Slc5a3

DIOPT Version :10

Sequence 1:NP_572397.1 Gene:rumpel / 31674 FlyBaseID:FBgn0029950 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_059087.2 Gene:Slc5a3 / 53881 MGIID:1858226 Length:718 Species:Mus musculus


Alignment Length:615 Identity:140/615 - (22%)
Similarity:237/615 - (38%) Gaps:172/615 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LMLAICAVIGIYFCLQLRLE-SRKQKANGSEEAASSAASYLVGGRQMKIFPITMSLISSFISG-- 84
            |..|..||:.:||.|.:.:. ....|:|     .|:.:.|.:.||.|....|..||..|.|..  
Mouse     5 LEAADIAVVALYFILVMCIGFFAMWKSN-----RSTVSGYFLAGRSMTWVAIGASLFVSNIGSEH 64

  Fly    85 -ITLLGTPTEVYLYGAQYMYIMGS--------LVLMGFCMYYFFLPVFHELNLISTYKYLEQRY- 139
             |.|.|:       ||...:.:|:        |.|:|    :.|:|::....:.:..:||.:|: 
Mouse    65 FIGLAGS-------GAASGFAVGAWEFNALLLLQLLG----WVFIPIYIRSGVYTMPEYLSKRFG 118

  Fly   140 -NRSLRLFGSVMFIVASLLWLPIVIYVPAIAFNQATGVNIHIVTPIVCVVCIFYTCIGGLKAVVW 203
             :|....|.::..::.....|.:.:|..|:...::.|.|:::...::..:....|..|||.||::
Mouse   119 GHRIQVYFAALSLLLYIFTKLSVDLYSGALFIQESLGWNLYVSVILLIGMTALLTVTGGLVAVIY 183

  Fly   204 TDVIQTLIM-FGAMALVLIKGTLDIGG------------PGV----------------VWQKAQE 239
            ||.:|.|:| .||:.|::| ..:.|||            |.|                |..||..
Mouse   184 TDTLQALLMIIGALTLMVI-SMVKIGGFEEVKRRYMLASPDVASILLKYNLSNTNACMVHPKANA 247

  Fly   240 TARLEVPNFSADLSERYTFYSLVLG----GVAHWLKSNAISQNMIQRYLSLPTLRDARIAIWTFI 300
            ...|..|.     .|...:...:||    .|.:|    ...|.::||.|:...:..|:.:  |.:
Mouse   248 LKMLRDPT-----DEDVPWPGFILGQTPASVWYW----CADQVIVQRVLAAKNIAHAKGS--TLM 301

  Fly   301 AGVLAFL-----MICGYTGLLIYATYSQCDPLETKLAQRNDQLLPLLVMDTLGS--------YP- 351
            ||.|..|     ::.|....:::|....|             :.|...|...||        || 
Mouse   302 AGFLKLLPMFIIVVPGMISRIVFADEIAC-------------INPEHCMQVCGSRAGCSNIAYPR 353

  Fly   352 --------GLPGVFVAGVFSAALSSLSTGLNSLSAVVLEDFVKTFRKSPLTEGQTAFVMRSVVVV 408
                    ||.|:.:|.:.:|.:|.|.:..||.|.:...|..|..|||..:        |.:::|
Mouse   354 LVMTLVPVGLRGLMMAVMIAALMSDLDSIFNSASTIFTLDVYKLIRKSASS--------RELMIV 410

  Fly   409 FGIIFVALV---------FAVEKLGAVLQLTITLSSVAN---GPLLGIFTAGVMLPWVNSKGALL 461
             |.||||.:         ..||..|.  |:.:.:..||:   .|:..:|...:.....|.:||..
Mouse   411 -GRIFVAFMVVISIAWVPIIVEMQGG--QMYLYIQEVADYLTPPVAALFLLAIFWKRCNEQGAFY 472

  Fly   462 GGFSSLIVMAWMCVSAQRDLVTGDLVYKRKPYSTMGCNYTFAGEPREFASLALDGAISSVPSAPF 526
            ||.:..::.|...:.|             ..|....|:     :|               .:.|.
Mouse   473 GGMAGFVLGAVRLILA-------------FTYRAPECD-----QP---------------DNRPG 504

  Fly   527 QLYRISYLY-----FTLFGALVTIVVALVT 551
            .:..|.|:|     |.:.| |:|::|:|:|
Mouse   505 FIKDIHYMYVATALFWITG-LITVIVSLLT 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rumpelNP_572397.1 SLC5sbd_NIS-SMVT 16..554 CDD:271383 140/615 (23%)
Slc5a3NP_059087.2 SLC5sbd_SMIT 9..718 CDD:271382 138/611 (23%)

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