DRSC/TRiP Functional Genomics Resources

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Protein Alignment rumpel and Gm5134

DIOPT Version :10

Sequence 1:NP_572397.1 Gene:rumpel / 31674 FlyBaseID:FBgn0029950 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_006513854.1 Gene:Gm5134 / 333669 MGIID:3646667 Length:695 Species:Mus musculus


Alignment Length:608 Identity:133/608 - (21%)
Similarity:232/608 - (38%) Gaps:166/608 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LVFCLMLAICAVIGIYFCLQLRLESRKQKANGSEEAASSAASYLVGGRQMKIFPITMSLISSFI- 82
            :.|.|:|.:|  :|::..|              ..:..:...:.:.|:.:..:.:.:|:.||.| 
Mouse    30 MTFYLLLVVC--VGLWALL--------------SHSRGTVKDFFLAGQNLAWWLMGISIYSSNIG 78

  Fly    83 SG--ITLLGTPTEVYLYGAQYMYIMGSL----VLMGFCMYYFFLPVFHELNLISTYKYLEQRYNR 141
            ||  :.|.|       .||.....:|:|    :.|.|.:.:.|:|::.:..:::..:||::|:. 
Mouse    79 SGHYMALAG-------IGAASGIAVGALEWNSIFMLFLLGWIFVPIYSKAEVVTLPEYLKKRFG- 135

  Fly   142 SLR--LFGSVMFIVASLL-WLPIVIYVPAIAFNQATGVNIHIVTPIVCVVCIFYTCIGGLKAVVW 203
            |||  ||.:.:|::..:. .:.:.|...|:........:|:.....|..:...||..|||..|.:
Mouse   136 SLRIQLFFTFIFLIVYIFSRISMEIGFGAMFLKMVWDTDIYQTMLTVLTIIGMYTITGGLATVAY 200

  Fly   204 TDVIQTLIMFGAMALVLIKGTLDIGG-PGVV----------WQKAQETARLE--VPN------FS 249
            .:.:|..||....||::.....::|| |.:|          .|:...||:.|  :|.      |.
Mouse   201 VESLQAGIMILGSALLMGYAFYEVGGYPKLVSKYMEAIPSKTQQGNWTAQPECYLPRQDAFHIFR 265

  Fly   250 ADLSERYTFYSLVLGGVAHWLKSNAISQNMIQRYLSLPTLRDARIAIWTFIAGVLAFLM-----I 309
            :.:|....:..|:||.....|......|..:||                |:||.....|     :
Mouse   266 SCVSGDIPWPGLILGATTVSLFYGCADQVSVQR----------------FLAGKSRLHMEGGCLL 314

  Fly   310 CGYTGLL--------------IY------ATYSQCDPLETKLAQRNDQLLPLLVMDTLGSYP-GL 353
            |||..||              :|      ...|:|.....:....:....|:||   ||..| ||
Mouse   315 CGYLKLLPMFLMVMPGMISRILYPDQVACVVPSECQKFCGRGTGCSALAYPVLV---LGVMPHGL 376

  Fly   354 PGVFVAGVFSAALSSLSTGLNSLSAVVLEDFVKTFRKSPLTEGQTAFVMRSVVVVFGIIFVALVF 418
            .|..::.|.::.:|||::..||.||:...: :.|:.:...||.:        :::.|..||.::.
Mouse   377 QGFMLSTVCASLMSSLTSIFNSSSALFTLN-IYTWIRPTATEKE--------LMIAGRFFVIILL 432

  Fly   419 AV-------------EKLGAVLQLTITLSSVANGPLLGIFTAGVMLPWVNSKGALLGGFSSLIVM 470
            ||             |.|...:|:   |.|.....:..:|...|....||.:||..|        
Mouse   433 AVTIVWIPIIEMAPNEILFEYMQV---LKSCLTPSMTAVFLLAVFCKRVNEQGAFWG-------- 486

  Fly   471 AWMCVSAQRDLVTGDL--VYKRKP---YSTMGCNYTFAGEPREFASLALDGAISSVPSAPFQLYR 530
                      |:.|..  |::...   |..:.|     |..|:               .|..:..
Mouse   487 ----------LIVGTTIGVFRLLAEFFYGPVTC-----GRDRQ---------------CPIFICG 521

  Fly   531 ISYLYFTLFGALVTIVVALVTSL 553
            :.||||.....||||::.|..||
Mouse   522 LHYLYFGFCLFLVTILIILAISL 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rumpelNP_572397.1 SLC5sbd_NIS-SMVT 16..554 CDD:271383 133/608 (22%)
Gm5134XP_006513854.1 SLC5-6-like_sbd 26..695 CDD:444915 133/608 (22%)

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