DRSC/TRiP Functional Genomics Resources

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Protein Alignment rumpel and SPOM_SPAC869.03C

DIOPT Version :10

Sequence 1:NP_572397.1 Gene:rumpel / 31674 FlyBaseID:FBgn0029950 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_595016.1 Gene:SPOM_SPAC869.03C / 2543152 PomBaseID:SPAC869.03C Length:661 Species:Schizosaccharomyces pombe


Alignment Length:652 Identity:128/652 - (19%)
Similarity:241/652 - (36%) Gaps:160/652 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QSFGWPDYLVFCLMLAICAVIGIYFCLQLRLESRKQKANGSEEAASSAASYLVGGRQMKIFPITM 75
            |.:|:          .|...:|..|.:.:.|.:...|....|  ...:..:....|.:|...|:.
pombe     8 QGYGY----------GIVIGLGFAFAIVMILVTYVLKRYVGE--VQDSEHFTTASRSVKTGLISS 60

  Fly    76 SLISSFISGITLLGTPTEVYLYGAQYMYIMGSLVLMGFCMYY---------FFLPVFHELNLI-- 129
            :::||:....|||.:....|.||     :.||       |:|         ||..:..::..:  
pombe    61 AVVSSWTWPGTLLTSAGMAYEYG-----VCGS-------MWYSFAFTVQITFFTVIALQVKRVAP 113

  Fly   130 ---STYKYLEQRY---NRSLRLFGSV--MFIVASLLWLPIVIYVPAIAFNQATGVNIHIVTPIVC 186
               :..:.::.|:   :.::.||.::  ..||:::|.|.     .:.|.:..||:::.....::.
pombe   114 GAHTIVEIVKARFGQASHAVFLFYALGTNIIVSAMLLLG-----GSQAISAITGMHVVAAGFLLP 173

  Fly   187 VVCIFYTCIGGLKAVVWTDVIQTLIMFGAMALVLI---KGTLDIGGPGVVWQKAQETAR------ 242
            :....||..||||:...:|...|:|::..:.:.|.   ..::.||....::....|.::      
pombe   174 LGVWLYTVSGGLKSTFLSDWTHTVIVYIVILITLFVAYTSSVHIGSIDKMYDLLTEVSKTNPSTG 238

  Fly   243 -----LEVPNFSADLSERYTFYSLVLGGVAHWLKSNAISQNMI-QRYLSLPTLRDARIAIWTFIA 301
                 |.|.|..|    .:..:::|:||.|......:..|..| .:.:|         |:..:.|
pombe   239 YKGSYLTVTNRDA----VFVGWNIVIGGFATVFCDPSYGQKAIAAKPIS---------AMKGYFA 290

  Fly   302 GVLAFLMI-----------C-GYTGLLIYATYSQCDPLETKLAQRNDQLLPLLVMDT--LGSYPG 352
            |.||:|::           | ..|...:..||.  ||:.:|.....   :|||...|  :|....
pombe   291 GGLAWLIVPWAMGSAAALSCLALTNNPVSVTYP--DPVSSKQVSEG---MPLLYGMTALMGKNGA 350

  Fly   353 LPGVFVAGVFSAALSSLSTGLNSLSAVVLEDFVKTFRKSPLTEGQTAFVMRSVVVVFGIIFVALV 417
            ..||.:  :|.|:.|:.|..|.:.|:|:..|..:.:.:...:..:...|....|.:|.:...||.
pombe   351 AAGVLI--LFMASTSATSAELVAFSSVMTYDVYRNYFRPNASGKELVRVTHVFVTIFAVCMGALA 413

  Fly   418 FAVEKLGAVLQLTITLSSVANGPLLGIFTAGVMLPW--VNSKGALLGGFSSLI--VMAWM--CVS 476
            .....:|..:...||...:|.||  .:|...:.|.|  :|..|.::|.....|  |:.|:  |..
pombe   414 VLFNYIGITISWIITFIGIALGP--AVFGITLTLFWKKMNKYGMIIGCPMGSITGVVCWVGSCYK 476

  Fly   477 AQRDLVTGDLVYKRKPYSTMGCNYT--FAG-------------------EPREFASLALDGAISS 520
            ....:|....:  ..||:....|:|  |:|                   ...|...|..|.....
pombe   477 FSNGVVNKTTL--NTPYANAVGNFTGLFSGLIYIVLISYFFPNKSDDLNNLNEKFVLGDDATAEE 539

  Fly   521 VPSA-----------------------------PFQLYRISYLYFTLF--GALVTIVV-ALVTSL 553
            :..|                             |..:|...|::..||  |.::.|:: .|:.:|
pombe   540 IVDAETEKKQLDRSLRIGIFVSWIIFFILVIIVPLPMYGSKYIFSKLFFRGWIIVIIIWTLIAAL 604

  Fly   554 LL 555
            .:
pombe   605 YI 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rumpelNP_572397.1 SLC5sbd_NIS-SMVT 16..554 CDD:271383 125/644 (19%)
SPOM_SPAC869.03CNP_595016.1 SLC5sbd_DUR3 12..515 CDD:271370 113/555 (20%)

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