DRSC/TRiP Functional Genomics Resources

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Protein Alignment rumpel and SPOM_SPBC23G7.13C

DIOPT Version :10

Sequence 1:NP_572397.1 Gene:rumpel / 31674 FlyBaseID:FBgn0029950 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_595871.1 Gene:SPOM_SPBC23G7.13C / 2540527 PomBaseID:SPBC23G7.13C Length:664 Species:Schizosaccharomyces pombe


Alignment Length:675 Identity:132/675 - (19%)
Similarity:228/675 - (33%) Gaps:228/675 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QSFGWPDYLVFCLMLAICAVIGIYFCLQL-RLESRKQKANGSEEAASSAASYLVGGRQMKIFPIT 74
            ||.|:.  :|..|.|...|:: |:....| :..:..|.:.....|:.|..:.||..         
pombe     8 QSVGYG--IVVGLGLGFAALM-IFVSWSLKKFNNENQTSEHFNTASHSVRTGLVAS--------- 60

  Fly    75 MSLISSFISGITLLGTPTEVYLYGAQ--YMYIMGSLV-LMGFCMY-----------YFFL----- 120
             :::||:....|||.:..:.|.||..  :.|..|:.| ::.|.:.           :.||     
pombe    61 -AVVSSWTWASTLLTSAQKTYQYGVSGAFWYASGACVQILLFTVLAIELKRKAPNAHTFLEVVRA 124

  Fly   121 ---PVFHELNLISTYKYLEQRYNRSLRLFGSVMFIVASLLWLPIVIYVPAIAFNQATGVNIHIVT 182
               |:.|.:.|:..|                    :.::|.:.:::...:...:..||:|...|.
pombe   125 RCGPIAHGVFLVFAY--------------------ITNILVMAMLLCGGSATISSVTGMNTVAVC 169

  Fly   183 PIVCVVCIFYTCIGGLKAVVWTDVIQT------LIMFGAMALVLIKGTLDIGGPGVVWQKAQETA 241
            .::.|..|.||..||:||...||.|.|      ||||   :|........||.||.::...:|..
pombe   170 FLLPVGVIIYTMFGGIKATFLTDYIHTVIILVILIMF---SLATYSADKKIGSPGKLYDMLKEAG 231

  Fly   242 RLEVPNFSADLS-------ERYTFYSLVLGG--------VAHWLKSNAISQNMIQRYLSLPTLRD 291
            .......:|..|       |...|:.:.|.|        ..:|.|  ||:.|...   :||    
pombe   232 DAHPVAGNAQGSYLTMRSQEGAIFFIINLAGNFGTVFVDNGYWQK--AIAANPAS---ALP---- 287

  Fly   292 ARIAIWTFIAGVLAF------------LMICGYTGLLIYATY-SQCDPLETKLAQRNDQLLPLLV 343
                  .:|.|.||:            |:..|......:.|| ::...||..    ...:||...
pombe   288 ------GYILGGLAWFAIPWLAATTMGLVALGLENKPYFPTYPNRMSDLEVS----EGLVLPYAA 342

  Fly   344 MDTLGSYPGLPGVFVAG-------VFSAALSSLSTGLNSLSAVVLEDFVKTFRKSPLTEGQTAFV 401
            :..:|.         ||       ||.|..|:.|..|.::|::...|..|.:.:...|..:..:.
pombe   343 IALMGR---------AGANATLLLVFMAVTSAASAELIAVSSIFTYDIYKQYVRPRATGKELLYT 398

  Fly   402 MRSVVVVFGII----------------FVALVFAVEKLGAVLQLT-------ITLSSVANGPLLG 443
            ..:.::|||..                ::.|:..|....||:..|       ::..:|...|:||
pombe   399 GHASLIVFGFAMSGFATGLYYGQVSMGYLYLLMGVLVCPAVVPATCVMLFSRVSTIAVTVSPVLG 463

  Fly   444 IFTAGVMLPW-------------VNSKGA---LLGG------------------------FSSLI 468
            |.::  ::.|             :.:.||   :|.|                        |:.|:
pombe   464 IISS--IITWLVVARAEGGKTLTIETTGANNPMLAGNVVGLLSPALYILILSIIFPEKYDFNRLL 526

  Fly   469 VMAWMCVSAQRDLVTGDLVYKRK-------------------PYSTMGCNYTFAGEPREFASLAL 514
            ....|..|::.|.:.......|.                   |:...|..|.|:  .|.|....:
pombe   527 ATFAMHFSSEEDEIQQTKKLNRASVISKVAALIITAAFIILWPWPMYGTGYIFS--KRFFTGWVV 589

  Fly   515 DGAISSVPSAPFQLYRISYLYFTLF 539
            .|.|              :::||:|
pombe   590 VGLI--------------WIFFTVF 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rumpelNP_572397.1 SLC5sbd_NIS-SMVT 16..554 CDD:271383 129/670 (19%)
SPOM_SPBC23G7.13CNP_595871.1 SLC5sbd_DUR3 12..516 CDD:271370 112/569 (20%)

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