DRSC/TRiP Functional Genomics Resources

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Protein Alignment rumpel and LOC100488353

DIOPT Version :10

Sequence 1:NP_572397.1 Gene:rumpel / 31674 FlyBaseID:FBgn0029950 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_002936886.2 Gene:LOC100488353 / 100488353 XenbaseID:XB-GENE-29079155 Length:606 Species:Xenopus tropicalis


Alignment Length:568 Identity:200/568 - (35%)
Similarity:324/568 - (57%) Gaps:51/568 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ASLQSFGWPDYLVFCLMLAICAVIGIYFCLQLRLESRKQKANGSEEAASSAASYLVGGRQMKIFP 72
            |||.| .| ||:||..:|.|.||||||:....|      :.|.|:|       :|.|||.|...|
 Frog     7 ASLFS-PW-DYVVFAAVLLISAVIGIYYAFAGR------RKNTSQE-------FLTGGRSMSALP 56

  Fly    73 ITMSLISSFISGITLLGTPTEVYLYGAQYMYIMGSLVLMGFCMYYFFLPVFHELNLISTYKYLEQ 137
            :.:||.:||:|.:|:||||.:||.:||.|.....|.|.:.......|||||:.||:.|||:|||.
 Frog    57 VALSLTASFMSAVTVLGTPADVYRFGAIYSMFAFSYVFVVIICAEIFLPVFYRLNITSTYEYLEL 121

  Fly   138 RYNRSLRLFGSVMFIVASLLWLPIVIYVPAIAFNQATGVNIHIVTPIVCVVCIFYTCIGGLKAVV 202
            |:|:.:|:.|:|:||:..:|:..||||.||:|.||.:|.|:........:||.||..:||:|||:
 Frog   122 RFNKCVRILGTVIFIIEMVLYTGIVIYAPALALNQVSGFNLWGAMTATGLVCTFYCTLGGIKAVI 186

  Fly   203 WTDVIQTLIMFGAMALVLIKGTLDIGGPGVVWQKAQETARLEVPNFSADLSERYTFYSLVLGGVA 267
            ||||.|.:||......|:|:|.:..||...:...:....||...:|......|:||:::|:||..
 Frog   187 WTDVFQIVIMVAGFIAVIIRGVVVQGGIQTIINDSYYGGRLNFWDFDPQPLRRHTFWTIVIGGTF 251

  Fly   268 HWLKSNAISQNMIQRYLSLPTLRDARIAIWTFIAGVLAFLMICGYTGLLIYATYSQCDPLETKLA 332
            .|:....::|:.:|||:|..|...|:::::..:.|::..|......||::|:.|..|||..:::.
 Frog   252 LWVGIYGVNQSQVQRYISCKTKGQAKLSLYINLIGLMIILACAVLCGLILYSVYKDCDPWTSQII 316

  Fly   333 QRNDQLLPLLVMDTLGSYPGLPGVFVAGVFSAALSSLSTGLNSLSAVVLEDFVKTFRKSPLTEGQ 397
            ...|||:|.||:|.|..|||:||:|||..:|..||::|:.:|:|:||.:||.:|.:  :.|:|.:
 Frog   317 SAPDQLMPYLVLDILQGYPGVPGLFVACAYSGTLSTVSSSINALAAVTVEDLIKPY--THLSENK 379

  Fly   398 TAFVMRSVVVVFGIIFVALVFAVEKLGAVLQLTITLSSVANGPLLGIFTAGVMLPWVNSKGALLG 462
            .:::.:.:..::||:.:|:......:|:|:|..:::.::..|||||:|:.|:..|:.||.||::|
 Frog   380 LSWISKGMSALYGILCIAMAAVASFMGSVIQAALSIFAMVGGPLLGLFSLGLFFPFCNSVGAIVG 444

  Fly   463 ---GFSSLIVMAWMCVSAQRDLVTGDLVY-------KRKPYSTMGCNYTFAGEPREFASLALDGA 517
               |||   :..|..:.||        :|       :..|.|..|||  |:.....:.|:..:..
 Frog   445 LLFGFS---MSLWAGIGAQ--------IYPPLPERSRPLPLSIAGCN--FSTMDTNWTSMTTEPT 496

  Fly   518 ISSV-----------PSAPFQLYRISYLYFTLFGALVTIVVALVTSLL 554
            ::.|           |......|.:|||||:..|.:|||:|.::.||:
 Frog   497 MAMVTNLIPLDTSERPVLADYWYSLSYLYFSTLGTIVTILVGVIVSLM 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rumpelNP_572397.1 SLC5sbd_NIS-SMVT 16..554 CDD:271383 194/558 (35%)
LOC100488353XP_002936886.2 SLC5-6-like_sbd 10..550 CDD:444915 197/565 (35%)

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