DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rumpel and slc5a5

DIOPT Version :10

Sequence 1:NP_572397.1 Gene:rumpel / 31674 FlyBaseID:FBgn0029950 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001116937.1 Gene:slc5a5 / 100144711 XenbaseID:XB-GENE-486472 Length:600 Species:Xenopus tropicalis


Alignment Length:587 Identity:180/587 - (30%)
Similarity:300/587 - (51%) Gaps:54/587 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EELRASLQSFGWPDYLVFCLMLAICAVIGIYFCLQLRLESRKQKANGSEEAASSAASYLVGGRQM 68
            |.|..||    | ||.||..||.:...||:::..          ::|.::.:.   .:..|||.|
 Frog    49 ESLTFSL----W-DYGVFATMLIMSTGIGLFYAF----------SHGGQKTSD---DFFTGGRSM 95

  Fly    69 KIFPITMSLISSFISGITLLGTPTEVYLYGAQYMYIMGSLVLMGFCMYYFFLPVFHELNLISTYK 133
            ...|:.:||.:||:|.:.:||.|.|.|.||.:::.:....:|......|.|:|:|:.|.:.|||:
 Frog    96 SAVPVGLSLSASFMSAVQVLGVPAEAYRYGVKFLQMCIGQILNSVMTAYIFMPIFYRLGITSTYQ 160

  Fly   134 YLEQRYNRSLRLFGSVMFIVASLLWLPIVIYVPAIAFNQATGVNIHIVTPIVCVVCIFYTCIGGL 198
            |||.|::||:||:|::.|::.::.:..||||.||:..||.||::|.........:|.|||.:||:
 Frog   161 YLEMRFSRSVRLYGTIQFLLGTMFYTGIVIYAPALILNQVTGLDIWASLFSTGAICTFYTTVGGM 225

  Fly   199 KAVVWTDVIQTLIMFGAMALVLIKGTLDIGGPGVVWQKAQETARLEVPNFSADLSERYTFYSLVL 263
            |||:||||.|..:|......|.|:|...:||.....:.|...:|:...:|..|...||||::.|:
 Frog   226 KAVIWTDVFQVFVMLSGFFAVAIRGIHLVGGFSDAIEVAGNYSRINFGDFDPDPRRRYTFWTFVM 290

  Fly   264 GGVAHWLKSNAISQNMIQRYLSLPTLRDARIAIWTFIAGVLAFLMICGYTGLLIYATYSQCDPLE 328
            |....||....::|..:|||::..|..:|::||......:...:......|::::..|..||||.
 Frog   291 GSTFLWLSMYGVNQAQVQRYVACKTENEAKLAILVNQVALCVIVSSAVTCGIVMFVYYLNCDPLL 355

  Fly   329 TKLAQRNDQLLPLLVMDTLGSYPGLPGVFVAGVFSAALSSLSTGLNSLSAVVLEDFVKTFRKSP- 392
            .......||.:|..|::....|||:||:|:|..:|..||:.||.:|:::||.:||.::.  |.| 
 Frog   356 AGYVSAPDQYMPYFVLEIFDQYPGIPGLFLACAYSGTLSTASTSINAMAAVTVEDLIRP--KYPN 418

  Fly   393 LTEGQTAFVMRSVVVVFGIIFVALVFAVEKL--GAVLQLTITLSSVANGPLLGIFTAGVMLPWVN 455
            ::..:...:.:.:.:.:|...:. |.|:..|  |.|||.:.|:..|.:|||||.|..|:.....|
 Frog   419 ISTKKLTLISKGLSLAYGCSCIT-VAALSSLLGGGVLQGSFTVMGVISGPLLGAFMLGMFFASCN 482

  Fly   456 SKGALLGGFSSLIVMAWMCVSAQRDLVTGDLVYKRKPYST--MGCNYTFAGE-PREFASLAL--- 514
            :.|...|....|::..|:.|        |..:|   |.|.  ||...|||.. |...:|..:   
 Frog   483 TIGVFAGLLVGLVISLWVAV--------GGTIY---PPSAEMMGVLPTFAEHCPLYNSSKGIIYG 536

  Fly   515 DGAISSV------PSAPFQLYRISYLYFTLFGALVTIVVALVTSLLL----RETDLDGVDTRLLT 569
            ...:.::      |:....||.:||||:.:.|.:.|:::.::.|...    |||...|:   ::.
 Frog   537 PAPVQNITHTLERPALADDLYALSYLYYGVVGTISTVIIGVIVSKFTGPTKRETIAPGL---MVG 598

  Fly   570 PF 571
            ||
 Frog   599 PF 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rumpelNP_572397.1 SLC5sbd_NIS-SMVT 16..554 CDD:271383 169/552 (31%)
slc5a5NP_001116937.1 SLC5sbd_NIS 56..587 CDD:271393 170/558 (30%)

Return to query results.
Submit another query.