DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18155 and PCS60

DIOPT Version :9

Sequence 1:NP_996360.2 Gene:CG18155 / 31668 FlyBaseID:FBgn0029945 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_009781.3 Gene:PCS60 / 852523 SGDID:S000000426 Length:543 Species:Saccharomyces cerevisiae


Alignment Length:591 Identity:116/591 - (19%)
Similarity:217/591 - (36%) Gaps:120/591 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SFDEEERSNVVVPTFKKAMLYPDEIAVKDINGEYTYFQLYMAAKRLGIQISNICGGAALSNVTYL 100
            :|...:...|:||.....:.|      :|::....:||.......     |.:.|.....:...:
Yeast    14 TFSVSDNVAVIVPETDTQVTY------RDLSHMVGHFQTMFTNPN-----SPLYGAVFRQDTVAI 67

  Fly   101 CSNNAL-WIAIQWSCWISGQVAVPLESGQAIDQLQRQASNCKTKLLIATKEFESLAQELSQGVKS 164
            ...|.| :|.......:..::..||.......:.....::.|:|.:...|....|  :.|:.:||
Yeast    68 SMRNGLEFIVAFLGATMDAKIGAPLNPNYKEKEFNFYLNDLKSKAICVPKGTTKL--QSSEILKS 130

  Fly   165 AT----IILDHSFLPTAESV-----SSTSMYAKQLVAIQGVIVTENT----FPNDFYSKAPAMLI 216
            |:    .|::.:|..|...|     |....|.:.:..........||    ||....|...|:::
Yeast   131 ASTFGCFIVELAFDATRFRVEYDIYSPEDNYKRVIYRSLNNAKFVNTNPVKFPGFARSSDVALIL 195

  Fly   217 YTPNAVNSPKPVLLTHRNIEAQMRCLIGTWHLGPTDCMLPILSMNRMHAALAAVLS---VGGNVV 278
            :|....::||.|.|.|.||......:..|:.|.|.|....::.:..:|..:..:||   ..|:||
Yeast   196 HTSGTTSTPKTVPLLHLNIVRSTLNIANTYKLTPLDRSYVVMPLFHVHGLIGVLLSTFRTQGSVV 260

  Fly   279 LQQKFDGHNAWSALLGINS------PSKQRVTLFLAMPIVYKRLIVEYEKMFAKDSRMVEYIVNH 337
            :...|.....|...:..|.      |:...:.|.:..|..:..                      
Yeast   261 VPDGFHPKLFWDQFVKYNCNWFSCVPTISMIMLNMPKPNPFPH---------------------- 303

  Fly   338 CRQKIRLMATAFALLPDSVFYRWREITGQNIYEYYGMMETGLVLGHPLNKRQRDSPHNGPTAVAM 402
                ||.:.:..:.|..:.|::..:.....:.|.|.|.|.    .|.:.                
Yeast   304 ----IRFIRSCSSALAPATFHKLEKEFNAPVLEAYAMTEA----SHQMT---------------- 344

  Fly   403 ANNTAPNDYRPGTLGSPLKGVTARLISNKGDELITCKNELGGSVDSGLIPVEDIGGDASLAGTII 467
            :||..|...:|||:|.| :|||..::.:.               |:.|.|.:            :
Yeast   345 SNNLPPGKRKPGTVGQP-QGVTVVILDDN---------------DNVLPPGK------------V 381

  Fly   468 GELQIAGSNLVSNTLANNNQEMEHKGTTNNEEQENNQDGFFKTGDICAYRNGNFYFLS-KSSDIF 531
            ||:.|.|.| |:...|||.:.        |:|....::.:|:|||...:....|..|: :..::.
Yeast   382 GEVSIRGEN-VTLGYANNPKA--------NKENFTKRENYFRTGDQGYFDPEGFLVLTGRIKELI 437

  Fly   532 TVGGYKVYGSEIKKVLISHPNINDVAVLGIPNKMWGHRLGVICIVSPDADIDLDAIKTYCYRHLP 596
            ..||.|:...|:..:::|||.|::....|:|:.|:|..:....::.....:..:.:..:..:||.
Yeast   438 NRGGEKISPIELDGIMLSHPKIDEAVAFGVPDDMYGQVVQAAIVLKKGEKMTYEELVNFLKKHLA 502

  Fly   597 AHKCPT 602
            :.|.||
Yeast   503 SFKIPT 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18155NP_996360.2 CaiC 53..604 CDD:223395 112/574 (20%)
AFD_class_I 58..607 CDD:302604 111/569 (20%)
PCS60NP_009781.3 FACL_fum10p_like 18..531 CDD:341249 115/587 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002270
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R434
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

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