DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18155 and DIP2

DIOPT Version :9

Sequence 1:NP_996360.2 Gene:CG18155 / 31668 FlyBaseID:FBgn0029945 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_612019.2 Gene:DIP2 / 252479 FlyBaseID:FBgn0024806 Length:1773 Species:Drosophila melanogaster


Alignment Length:642 Identity:124/642 - (19%)
Similarity:214/642 - (33%) Gaps:155/642 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 TFKKAMLYPDEIAVKDINGE----YTYFQLYMAAKRLGIQISNICGGAALSNVT----------Y 99
            :||..|     ..|.|.||:    .||.:|...|:::...:|..........||          |
  Fly   460 SFKSPM-----ATVLDPNGKVTTTLTYGKLLSRAQKIAHALSTKIFSKGPEQVTLKPGDRVALVY 519

  Fly   100 LCSNNALWIAIQWSCWISGQVAVPLE-----SGQAIDQLQRQASNCKTKLLIATKEFESLAQELS 159
            ..::...:|...:.|...|.|.:|:|     |.....|:....|:|...:.:.       ::...
  Fly   520 PNNDPLSFITAWYGCMFRGLVPLPIELPLSSSDTPPQQVGFLLSSCGITVALT-------SEACL 577

  Fly   160 QGVKSATIILDHSFLPTAESVSSTSMYAKQLVAIQG-----VIVTEN--TFPNDFY-------SK 210
            :|:..:|               :|...||    ::|     ..|||:  ..|.:|.       ..
  Fly   578 KGLPKST---------------TTGEIAK----LKGWPRLQWFVTEHLPKPPKEFNVGNLRADDS 623

  Fly   211 APAMLIYTPNAVNSPKPVLLTHRNIEAQMRCLIGTWHLGPTDCMLPILSMNR----MHAALAAVL 271
            |.|.:.||.:...|...|.:|...:....|.|....|....:.::.:|...|    .|:.|.:||
  Fly   624 AAAYIEYTTDKEGSVMGVTVTRAAMINHCRALTMACHYTEGETIVCVLDFKREVGLWHSVLTSVL 688

  Fly   272 SVGGNVVLQQKFDGHNAWSALLGINSPS-KQRVTLFLAMPIVYKRLIVEYEKMFAKDSRMVEYIV 335
            : |.:|:...        .||:.:...| .|.:|...|...:.|...:.:..:..||.:.:..  
  Fly   689 N-GMHVIFIP--------YALMKLRPSSWMQLITKHRASCCLVKSRDLHWGLLATKDHKDISL-- 742

  Fly   336 NHCRQKIRLMATAFALLPDSV-----FYRWREITGQNIYEYYGMMETGL--------VLGHPLNK 387
                ..:|::..|....|.|:     |.        ::::..|:....:        |....|.:
  Fly   743 ----SSLRMLLVADGANPWSLSSCDQFL--------SVFQAKGLRSDAICPCASSSEVFTVSLRR 795

  Fly   388 RQRDSPHNGPTA--------VAMANNTAPNDYRPG----TL---GSPLKGVTARLISNKGDELIT 437
            ..|.|....|:|        .|:::.....|....    ||   |..:......::.::|..:: 
  Fly   796 PGRGSCGFSPSATGRGVLSMAALSHGVVRVDSEDSLTSLTLQDCGQVMPAAQMVVVRSEGPPVL- 859

  Fly   438 CKNELGGS--VDSGLIPVEDIGGDASLAGTIIGELQIAGSNLVSNTLANNNQEMEHKGTTNNEEQ 500
            ||.:..|.  |.||.......|.|.....|.          .|...|....|..:..||.|...:
  Fly   860 CKTDQVGEICVTSGSTSASYFGLDGMTNSTF----------KVQPLLEELEQPKDGNGTVNIISK 914

  Fly   501 ENNQDGFFKTGDICAYRNGNFYFLSKSSD-IFTVGGYKVYGSE-IKKVLISHP----NINDVAVL 559
            ...:|.:.::|.:.....|...|:..|.| :.||.|.|....: |..||...|    ....:||.
  Fly   915 PIGEDFYVRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMRFIYRGRIAVF 979

  Fly   560 GIPNKMWGHRLGVICIVSPDADID---------LDAIKT------YCYRHLPAHKCP 601
            .| ..:...|:.||....||...:         |.|:.:      ||...:|.:..|
  Fly   980 SI-KVLRDERVCVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGIYCLALVPPNHLP 1035

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18155NP_996360.2 CaiC 53..604 CDD:223395 122/638 (19%)
AFD_class_I 58..607 CDD:302604 121/633 (19%)
DIP2NP_612019.2 DMAP_binding 3..115 CDD:283995
ARG80 33..369 CDD:227400
PRK09192 470..1061 CDD:236403 120/627 (19%)
Dip2 470..1054 CDD:213273 120/627 (19%)
AMP-binding 1142..1587 CDD:278902
AFD_class_I 1159..1762 CDD:302604
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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