DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18155 and acs-12

DIOPT Version :9

Sequence 1:NP_996360.2 Gene:CG18155 / 31668 FlyBaseID:FBgn0029945 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_508035.1 Gene:acs-12 / 180375 WormBaseID:WBGene00009106 Length:550 Species:Caenorhabditis elegans


Alignment Length:424 Identity:86/424 - (20%)
Similarity:160/424 - (37%) Gaps:112/424 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 LIYTPNAVNSPKPVLLTHRNIEAQMRCLIGT-----WHLGPTD-CMLPILSMNRMHAALAAVLSV 273
            |.|:.......|.::.||:.:.|:...:..|     :..|.|. .|:|:.....:.|.|.|:|: 
 Worm   181 LPYSSGIHGKRKGIVTTHKVMVAKTMVMWNTSKHHEFRRGDTTLTMIPLHKQCGLDAILCALLN- 244

  Fly   274 GGNVVLQQKFDGHNAWSALLGINSPSKQRVTLFLAMPIVYKRLIVEYEKMFAKDSRMVEYIVNHC 338
            |..||.::.|..|...:.:      .:.::......|.:...::.|.|              ||.
 Worm   245 GLTVVTEKNFCVHTFMTCI------QRYKIRAVHLTPYLMNLMMFEAE--------------NHT 289

  Fly   339 R--QKIRLMATAFALLPDSVFYRWREI--TGQNIYEYYGMMETGLVLGHPLNKRQRDSPHNGPTA 399
            .  :.:..:.|....:.:.::..:.||  :.:.:.:.|||.|.||:.                  
 Worm   290 YNIESLEWVVTGADAVTEELYEEFTEIFPSVKTVTQTYGMTEVGLIC------------------ 336

  Fly   400 VAMANNTAPNDYRP--GTLGSPLKGVTARLISNKGDELITCKNELGGSVDSGLIPVEDIGGDASL 462
                 .|...:|.|  |.|.:.|:.....:::.|         |||.. :.|.|.|:.|.     
 Worm   337 -----RTYNKNYSPSCGQLTANLEMKVLDILTGK---------ELGPR-EKGQICVKGIA----- 381

  Fly   463 AGTIIGELQIAGSNLVSNTLANNNQEMEHKGTTNNEEQENNQDGFFKTGDICAY-RNGNFYFLSK 526
                      |.|..::|..|.               :|:..||:.:||||..: ..||.:.:.|
 Worm   382 ----------AESPYLNNPKAT---------------EEHFLDGWRRTGDIGFFDEEGNVHLVDK 421

  Fly   527 SSDIFTVGGYKVYGSEIKKVLISHPNINDVAVLGIPNKMWGHRLGVICIVSPDADIDLDAIKTYC 591
            ..::..|.||:|...||:.:|::|..:.:.||:.|.|::.|.|.....::........|.:|.|.
 Worm   422 LKEMIKVFGYQVIPKEIETLLLTHQAVEEAAVVAINNELSGERPVAFVVLKKGFVATEDDLKDYV 486

  Fly   592 ------YRH---------LPAHKCPTVFKTLVSK 610
                  |:|         ||...|.|:.:.|:::
 Worm   487 NKRVIRYKHLVRVNITQFLPKSACGTLLRRLLAE 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18155NP_996360.2 CaiC 53..604 CDD:223395 85/416 (20%)
AFD_class_I 58..607 CDD:302604 85/419 (20%)
acs-12NP_508035.1 PLN02246 2..518 CDD:215137 85/420 (20%)
Firefly_Luc_like 33..514 CDD:213279 85/416 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.