DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18155 and acs-1

DIOPT Version :9

Sequence 1:NP_996360.2 Gene:CG18155 / 31668 FlyBaseID:FBgn0029945 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001023937.1 Gene:acs-1 / 179043 WormBaseID:WBGene00018488 Length:623 Species:Caenorhabditis elegans


Alignment Length:649 Identity:117/649 - (18%)
Similarity:217/649 - (33%) Gaps:207/649 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 EKLRHSFDEEERSNVVVPTFKKAMLYPDEIAVKDINGEYTYFQLYMAAKRLGIQISNICGGAAL- 94
            ::||.:.|:       ||. |:.:::..|...|      ||.|:...|:.|.      ||...| 
 Worm    70 DRLRSAVDQ-------VPD-KEFLIFKREGIRK------TYSQVATDAENLA------CGLLHLG 114

  Fly    95 ----SNVTYLCSNNALWIAIQWSCWISGQVAVPLESGQAIDQLQRQASNCKTKLLIATKEFESLA 155
                ..:.....|...|...|::..::|.|.|.:......::|:........:.||....|:.  
 Worm   115 LKKGDRIGIWGPNTYEWTTTQFASALAGMVLVNINPSYQSEELRYAIEKVGIRALITPPGFKK-- 177

  Fly   156 QELSQGVKSATIILDHSFLP--TAESVSSTSMYAKQLVAIQGVI--------------------- 197
            ....|.:|        ..||  |.:....:.:.::.....|.:|                     
 Worm   178 SNYYQSIK--------DILPEVTLKEPGKSGITSRNFTCFQHLIMFDEEDKIYPGAWKYTDVMKM 234

  Fly   198 -----------VTENTFPNDFYSKAPAMLIYTPNAVNSPKPVLLTHRNIEAQMRCLIGTWHLG-- 249
                       :...|.|:|..:     :.||......||...|||.|:      |...:.:|  
 Worm   235 GTEEDRHHLSKIERETQPDDSLN-----IQYTSGTTGQPKGATLTHHNV------LNNAFFVGLR 288

  Fly   250 ------PTDCMLPILSMNRMHAALAAVLSVGGNVV-LQQKFDGHNAWSALLGINSPSKQRVTLFL 307
                  .|...:|    |.::.....|:.|...:. ||.......::.||..:.:..:::.|...
 Worm   289 AGYSEKKTIICIP----NPLYHCFGCVMGVLAALTHLQTCVFPAPSFDALAALQAIHEEKCTALY 349

  Fly   308 AMPIVYKRLIVEYEKMFAKDSRMVEYIVNHCRQKIRLMATAFALLPDSVFYRWREITGQNIYEYY 372
            ..|.::..:|                  ||               |:...|.            |
 Worm   350 GTPTMFIDMI------------------NH---------------PEYANYN------------Y 369

  Fly   373 GMMETGLVLGHP----LNKRQRDSPH-------NGPTAVA----MANNTAPNDYRPGTLGSPLKG 422
            ..:.:|.:.|.|    |.:|.....|       .|.|..:    |:....|.:.|..::|..:..
 Worm   370 DSIRSGFIAGAPCPITLCRRLVQDMHMTDMQVCYGTTETSPVSFMSTRDDPPEQRIKSVGHIMDH 434

  Fly   423 VTARLISNKGDELITCKNELGGSVDSGLIPVEDIGGDASLAGTIIGELQIAGSNLVSNTLANNNQ 487
            :.|.::..:     .|           ::|           ..:.||:.:.|.:::         
 Worm   435 LEAAIVDKR-----NC-----------IVP-----------RGVKGEVIVRGYSVM--------- 463

  Fly   488 EMEHKGTTNNEEQ---ENNQDGFFKTGDICA-YRNGNFYFLSKSSDIFTVGGYKVYGSEIKKVLI 548
                :...|:|||   |..||.::.||||.. :.||....:.:|.|:...||..:|.:|:::.|.
 Worm   464 ----RCYWNSEEQTKKEITQDRWYHTGDIAVMHDNGTISIVGRSKDMIVRGGENIYPTEVEQFLF 524

  Fly   549 SHPNINDVAVLGIPNKMWGHRLGVICI-----VSPDADIDLDAIKTYCYRHLPAHKCP--TVFK 605
            .|.::.||.::|:|::.:|.   |:|.     .|.:.....:.||.:|...:...|.|  .:||
 Worm   525 KHQSVEDVHIVGVPDERFGE---VVCAWVRLHESAEGKTTEEDIKAWCKGKIAHFKIPRYILFK 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18155NP_996360.2 CaiC 53..604 CDD:223395 109/624 (17%)
AFD_class_I 58..607 CDD:302604 111/622 (18%)
acs-1NP_001023937.1 PRK08315 53..615 CDD:236236 117/649 (18%)
FACL_like_2 252..604 CDD:213284 83/437 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R434
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.