DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dok and rog-1

DIOPT Version :9

Sequence 1:NP_572391.1 Gene:Dok / 31667 FlyBaseID:FBgn0029944 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_493958.2 Gene:rog-1 / 186242 WormBaseID:WBGene00018819 Length:599 Species:Caenorhabditis elegans


Alignment Length:558 Identity:124/558 - (22%)
Similarity:199/558 - (35%) Gaps:185/558 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 LQMTPTELQL---KSEDLGATIAMWPYRFIRKYGYRD-GKFTFEAGRKCTTGEGVFTLDHTNPQE 220
            |::|.|.:.|   |.|.|     :||...||:|||.. |.|.||:||:|.:|||:||.......|
 Worm    55 LRVTRTTITLEISKKECL-----VWPLPLIRRYGYTSAGIFFFESGRRCESGEGMFTFQSKKADE 114

  Fly   221 VFRCMSAKMK-----SMKKL---------------ISGDSLSTLECGENQFSAAAGMEPGSRSPL 265
            :|:.:.:.::     ||:|.               ||...:|    ..:..|:..|::..| .||
 Worm   115 IFQLIQSLIEEFANTSMEKQNMENSFRYQRQQSVPISSRRMS----NTSNTSSVFGLKYSS-PPL 174

  Fly   266 PPSPSSNPHGGEFEINSTQSCISLRGFISSNDSL-NNFSAGGGGASGATATGGGVLGSTGGITLS 329
            .|.||:...                   :||.|| :|||...|     :.|...:..|.......
 Worm   175 MPIPSARDR-------------------NSNTSLASNFSIRNG-----SHTVRPMPSSVQRFRSE 215

  Fly   330 VPANSNSNSSSSKHIPNKPPRKSPTTHCDKYRNIVKYEPVAITTISSPSANSDVNSSVILKPLEG 394
            |.|..||...:|            :.:...:.:.:.|.       |...::.|..|..|..|:..
 Worm   216 VFAGMNSEVLTS------------SMNSSGFNDSIGYH-------SYHRSSFDPRSGRINTPMRP 261

  Fly   395 ESISLPETAADLPPDLPLRNESASKAPP-------PERDYECIENITEAWRTRGVGDVRHSERMP 452
            .|::.....||         ||:|...|       |...:..:.|   :....|.|..|.|:.: 
 Worm   262 RSVTDTSDYAD---------ESSSYGYPSSHHHHLPHDSFHALNN---SVGMGGGGATRGSKLL- 313

  Fly   453 ILCDTSEFVRQRSVSKSTCGSQN--TPKIIDIDIGE----------GCTSATSISESNYDRLD-F 504
                 ...|.:|:..|:: |..|  .|..|:|...|          ..||::|::.|....:. .
 Worm   314 -----GNIVTERTNPKAS-GISNGILPPYINISPKEVPSSSRHHYYAATSSSSMTASAASEVSAA 372

  Fly   505 LSPNNK---TSSGYKTIVN--VTPGNRI-RCSPPPPNEYEL---IASPDTESFRK---------- 550
            ||..|:   :.||..|..:  .|..::: ||:|||.:..:|   ...|.|...::          
 Worm   373 LSAMNRDISSGSGSSTAASATATTSSKLPRCTPPPVSNRQLKRYAMVPGTSMSKRRISREDAKRA 437

  Fly   551 -----------------------ADDSH------------RGYGV--LRKASTTTNNN-----NL 573
                                   ||:::            ||..|  |....|||..:     :.
 Worm   438 FLSSDPRVGHVIDDPRYAAVNVEADENYANLRDIQTDKIMRGIDVETLTNLHTTTEPSPPLPRHH 502

  Fly   574 GISNSNISGGSSTITTATANKGGNLEAAAIDHRSYNGL 611
            .|..|..:|.:|:..:|.|...|.|:.:       |||
 Worm   503 QIQASTTAGATSSSLSAAAGTRGTLKPS-------NGL 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DokNP_572391.1 PH 6..110 CDD:214574
PH 6..107 CDD:278594
PH-like 138..232 CDD:302622 28/80 (35%)
rog-1NP_493958.2 PTB_FRS2 34..124 CDD:269913 28/73 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5513
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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