DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dok and frs3

DIOPT Version :9

Sequence 1:NP_572391.1 Gene:Dok / 31667 FlyBaseID:FBgn0029944 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_002662545.2 Gene:frs3 / 100330147 ZFINID:ZDB-GENE-131121-119 Length:627 Species:Danio rerio


Alignment Length:638 Identity:135/638 - (21%)
Similarity:211/638 - (33%) Gaps:196/638 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 EDNDLYCSSFDGLFIITLIPSEASIRCCIEPKTYMLQMTPTELQLKSEDLGATIAMWPYRFIRKY 189
            :||.|      ..|.:|.:..|.:     |..:..:::|.|||.|.:....|  ..|||..:|:|
Zfish    14 QDNHL------NKFKVTNVDDEGN-----ELGSGTMELTQTELILHTRKRDA--IRWPYLCLRRY 65

  Fly   190 GYRDGKFTFEAGRKCTTGEGVFTLDHTNPQEVFRCMSAKMKSMKKLISGDSLSTLECGENQFSAA 254
            ||....|:||:||:|.||:|:|....:..:|:|..       :::|:..:|::.:|  |......
Zfish    66 GYDSNLFSFESGRRCQTGQGIFAFKCSRAEEIFNL-------LQELMQCNSINVVE--EPMIMTR 121

  Fly   255 AGMEPGSRSPLPPSPSSNP-----------HGGEFEINSTQSCI------SLRGF---------- 292
            .|..|....|..|...:.|           .|.....:|:|..:      ||.|.          
Zfish   122 PGHAPEMDMPRTPQTPNTPAFPMQGFPNGYPGYPISADSSQPSLTNDHRHSLMGLDDQTHTYVNT 186

  Fly   293 ------ISSNDSLNNF----SAGGGGASGATAT--GGGVLGSTG--------------------- 324
                  :||...:::.    .|....|:..|.|  ||.:.|..|                     
Zfish   187 VGMETDLSSRHCVHSLPEVRPATYPEATTTTTTIRGGPIPGQPGMHCCPLDDPHKDPQVFLQPGA 251

  Fly   325 -------GITLSVPANSN-SNSSSSKHIPNK---------------PPRKSPTTH---------- 356
                   |.|   ||..: ......:|:|:.               ||.....||          
Zfish   252 QEVKFMLGPT---PAQRHLMERDRERHVPHSLRAPDGSSETEGEETPPVHMCNTHSYHHCHHLMH 313

  Fly   357 -------CDK----YRNI-----VKYEPVAITTIS-SPSANSDVNSSVILKPLEGESISLPETAA 404
                   |.:    |.||     .:.:.::.:|:| |.|..|..:||.     .|:|.:...   
Zfish   314 RHPSMEPCPESQLTYENINGLRGARRQRLSPSTVSQSQSLGSSSSSST-----TGDSRTHTH--- 370

  Fly   405 DLPPDLPLRNESASKAPPPERDYECIENITEAWRTRGVGDVRHSERMPILCDTSEF-VRQRSVSK 468
              |..|||.:...|..||  :.|.|...:..|...|..  :.:.|.:|.|....|: ..||...:
Zfish   371 --PHSLPLTHTHTSSLPP--QGYGCDRGMVAAGHRRTA--LLNYENLPSLPPVWEYRALQREEEE 429

  Fly   469 STCGSQNTPKIIDIDIGEGCTSATSISESNYDRLDFLSPNNKTSSGY--------------KTIV 519
                        |.|..|.........|..||..:: |....|.:||              :..|
Zfish   430 ------------DQDEDEDEDEYEEEEEEEYDEYEY-SEGPATPNGYHQESGGGGIHRDALQNYV 481

  Fly   520 N---VTPGNRIR-CSPPPPNEYELIASPDTESFRKADDSHRGYGVLRK--------ASTTTNNNN 572
            |   :.|..|:| ..||.|:..|.........||: ..:.||..:..:        .|...|...
Zfish   482 NTEQLPPPTRLRHACPPHPHPPERANRVFNFDFRR-QRAGRGSSICEQHSRHPPPPPSRQLNYIQ 545

  Fly   573 LGISN-----SNISGGSSTITTATANKGGNLEAAAIDHRSYNGLNYTMVSKPK 620
            :.:..     |..|||:.........|.| :.|||....|..|..|.::...|
Zfish   546 VDLEGEPSGCSGHSGGAPVPQRPPPLKRG-MAAAAAPPSSRRGECYAVIDLKK 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DokNP_572391.1 PH 6..110 CDD:214574
PH 6..107 CDD:278594
PH-like 138..232 CDD:302622 29/93 (31%)
frs3XP_002662545.2 PTB_FRS2 15..106 CDD:269913 33/110 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574597
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5513
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.870

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