DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dok and sema4g

DIOPT Version :10

Sequence 1:NP_572391.1 Gene:Dok / 31667 FlyBaseID:FBgn0029944 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_002938767.1 Gene:sema4g / 100038182 XenbaseID:XB-GENE-856594 Length:830 Species:Xenopus tropicalis


Alignment Length:233 Identity:49/233 - (21%)
Similarity:81/233 - (34%) Gaps:54/233 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 RQATLTLSTSSEEELKDWITALQTVAFCDTSPSGGIGAIEEDNDLYCSSFDGLFIITLIPSEASI 149
            |:..|..|..:||....|:...:.|:......|..:...::|...|       |....:..|.| 
 Frog   195 RRNLLQRSLKTEESNLHWLNDPEFVSAALVQESMNVEVGDDDKIYY-------FFNEKVVEENS- 251

  Fly   150 RCCIEPKTYMLQMTPTELQLKSEDLGA---------------TIAMWPYRFIRKYGYRDGKFTFE 199
                   .::...|.:..::..:|:|.               .:...|:..:.|..|     |.|
 Frog   252 -------AFLGSKTASVARVCKDDMGGKKILQKKWTSFLKARLVCYMPFYEVLKSAY-----TLE 304

  Fly   200 AGRKCTT-GEGVFTLDHTNPQEVFRCMSAKMKSMKKLISGDSLSTLECGENQFSAAAGMEPGSRS 263
            .|...|| ..|.|.|...|.:|...|..: :..::|:..|..:. .:....::|...|..|   |
 Frog   305 LGSWDTTIFYGAFILQWKNMEESAICRYS-ISDIQKVFEGPYME-YQYSSRKWSRYEGEVP---S 364

  Fly   264 PLPPSPSSNPHGGEFEINSTQSCISLRGFISSNDSLNN 301
            |.|.|..:|    ||.:|         ||.:|.|..||
 Frog   365 PRPGSCITN----EFRMN---------GFNTSQDLPNN 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DokNP_572391.1 PH 6..107 CDD:459697 6/21 (29%)
IRS 138..233 CDD:460473 20/110 (18%)
sema4gXP_002938767.1 Sema 47..499 CDD:472829 49/233 (21%)
PSI 500..>527 CDD:214655
Ig_Sema4B_like 557..643 CDD:409456
Ig strand A 557..563 CDD:409456
Ig strand B 567..575 CDD:409456
Ig strand C 581..587 CDD:409456
Ig strand C' 589..592 CDD:409456
Ig strand D 599..603 CDD:409456
Ig strand E 605..612 CDD:409456
Ig strand F 618..627 CDD:409456
Ig strand G 630..643 CDD:409456
Blue background indicates that the domain is not in the aligned region.

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