DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg5 and atg5

DIOPT Version :9

Sequence 1:NP_572390.1 Gene:Atg5 / 31666 FlyBaseID:FBgn0029943 Length:269 Species:Drosophila melanogaster
Sequence 2:XP_012818452.1 Gene:atg5 / 549199 XenbaseID:XB-GENE-1012765 Length:275 Species:Xenopus tropicalis


Alignment Length:271 Identity:127/271 - (46%)
Similarity:181/271 - (66%) Gaps:9/271 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAHDREVLRMIWEGQIGICFQADRDEIVGIKPEPFYLMISRLSYLPLVTDKVRKYFSRYISAEHQ 65
            |..|::|||.:|.|:|..||...:||:...:.||:||::.|:|||.||||||:|:|.:.:..| .
 Frog     1 MTDDKDVLRDVWFGRIPTCFTLYQDELTEREAEPYYLLLPRISYLTLVTDKVKKHFQKVMRTE-D 64

  Fly    66 DGAVWFDFNGTPLRLHYPIGVLYDLLHPEEDSTPWCLTIHFSKFPEDMLVKLNSKELLESHYMSC 130
            ...:||:|.|.||:.|||||:|:| ||....|.||.:|:||..||...|:...||:::|:|:||.
 Frog    65 ISEIWFEFEGIPLKWHYPIGLLFD-LHASNTSLPWSITVHFKNFPAKDLLHCQSKDVIEAHFMSS 128

  Fly   131 LKEADVLKHRGLVISAMQKKDHNQLWLGLVNEKFDQFWAVNRRLMEPYGDLESFKNIPLRIY-TD 194
            :||||.|||:..||:.||||||.|||:||.|:||:||||:||:|||...:...|:.||.||| ..
 Frog   129 VKEADALKHKSQVINEMQKKDHKQLWMGLQNDKFEQFWAINRKLMEVPPEDGGFRYIPFRIYQAI 193

  Fly   195 DDFTYTQKLISPISVGGQKKSLADLMAEL---STPV---RRAVGCRTHGIDLHEETQLQWMSEHL 253
            ::..:.|||..|::..|:..:|.||:.|:   :.|.   .:......|||:...||.:||:||||
 Frog   194 NERPFIQKLFRPVANDGRPYTLGDLIREVCPAAVPAEDEEKKYQVMIHGIEPMLETPVQWLSEHL 258

  Fly   254 SYPDNFLHLSV 264
            ||||||||:|:
 Frog   259 SYPDNFLHISI 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg5NP_572390.1 APG5 81..264 CDD:282025 91/189 (48%)
atg5XP_012818452.1 APG5 79..270 CDD:367816 92/192 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 151 1.000 Domainoid score I4328
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3566
Inparanoid 1 1.050 225 1.000 Inparanoid score I3416
OMA 1 1.010 - - QHG59300
OrthoDB 1 1.010 - - D457861at2759
OrthoFinder 1 1.000 - - FOG0004713
OrthoInspector 1 1.000 - - oto102366
Panther 1 1.100 - - LDO PTHR13040
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R110
SonicParanoid 1 1.000 - - X3313
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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