DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1677 and Zc3h18

DIOPT Version :10

Sequence 1:NP_572387.1 Gene:CG1677 / 31662 FlyBaseID:FBgn0029941 Length:1000 Species:Drosophila melanogaster
Sequence 2:XP_006531532.1 Gene:Zc3h18 / 76014 MGIID:1923264 Length:1008 Species:Mus musculus


Alignment Length:1117 Identity:269/1117 - (24%)
Similarity:401/1117 - (35%) Gaps:425/1117 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 PGSPNAKSQPSSFLSSVRSRSVSPQLYNQAAVDLNISHDDLSDVSDIEGEEKRTSSKNSMRPADE 213
            |.||..:.||:.....:...|.|.|       ||:.:.:   ..||:|.||..|..::......:
Mouse    47 PHSPEDEEQPALSDDDILRESGSEQ-------DLDGAGE---RASDLEEEENATRVQSQEETRSD 101

  Fly   214 NEDGAISNDSLPTLGEED-EVEQKQSTPNGK-ASSGDEKEPFAKETHTDDASNGLAPATALQEDL 276
            .||.|    |.|...::| |..:....|.|. ...||:.|........|:||:           :
Mouse   102 EEDRA----SEPKSQDQDSEAHELSRGPAGSPCEEGDDVEEDGTSDLRDEASS-----------V 151

  Fly   277 VKTHDDDALDFEAEEGECPEQAKEPSPMESTANETNQTKSTTKVSQDEGDD-DGEVDKDGDDKDG 340
            .:..|:..||::.   |.||   ||:|   .|.|....|:..:..:::|:. .||..|......|
Mouse   152 TRELDEHELDYDE---EVPE---EPAP---AAQEEEAEKAGAEEEEEKGEGAPGEEGKPDVQSVG 207

  Fly   341 DDKDTRKDGAGNGCLEDGAGNDSRKDDAGNGCLEEGEEEKDIVSVSTSSSQEKVEEGELEEGEVS 405
            :.:.|.            |..:.:|:| .:|.:::||                :::.:||||||.
Mouse   208 EQEPTE------------AAKEKKKED-DDGEIDDGE----------------IDDDDLEEGEVK 243

  Fly   406 DEDEKRPEETEPKPVCRFY------------------------TRGQCTWGMSCRFLHPGVTDKG 446
            |..:::   ..|:|.|||:                        .:|.|||||||||:||||.|||
Mouse   244 DPSDRK---VRPRPTCRFFMKDVVTPLSTLLPPIPNSIPLRGQVKGNCTWGMSCRFIHPGVNDKG 305

  Fly   447 NYTMFDNVIRPVPMQGGSTGASAPAAPSSTAAPRAGGSAYSSHASATADYHDYRTERPLHHRPPL 511
            ||::.... .|.|..|     :.|..|.                                   ||
Mouse   306 NYSLITKA-EPFPPNG-----APPLGPH-----------------------------------PL 329

  Fly   512 LHAPSIYGAPVHDARTLLPDGAP-VVVENAWERGLRTAKEMMRKANKRKEQDMDFEDKKMNLTLS 575
            :.| :.:|.||.|  .:||...| ...|:|||||||.|||:::||..||||:.|||:|:..:|:.
Mouse   330 MPA-NPWGGPVVD--EILPPPPPEPPTESAWERGLRHAKEVLKKATIRKEQEPDFEEKRFTVTIG 391

  Fly   576 PD--EMEKDSYYLKDRGGSSARSPPPPSANVREQPLNPLSMPLSMHPHAVAHANPRALLPLQYSV 638
            .|  |.:|::...:|   .::|.|    .:||:..|.|             :|:|         .
Mouse   392 EDDREFDKENEVFRD---WNSRVP----RDVRDTTLEP-------------YADP---------Y 427

  Fly   639 YGPPPDRY---GRPQYMPPQYDDVDAY----------GRMTRYRELPPHRMPHYEDDRRSR---- 686
            |....:|:   |:.:....||.:.:.|          .|..|.||....|....|.:||.|    
Mouse   428 YDYEIERFWRGGQYENFRVQYTEAEPYHNYRERERERERENRQRERERERERDRERERRQRERER 492

  Fly   687 ------------------------------------------------------PTREVIVQRVE 697
                                                                  |:|:....:.|
Mouse   493 ERERERDKERQRRKEEWERERAKRDEKDRQHRDRDRDKDREKDKEKPKPRSPQPPSRQAEPPKKE 557

  Fly   698 AAG------RGDEWSDPWMRSKSVGR--GSYEREDRRRRDRRSYSSNSSYSTSNSSQSDSSSDS- 753
            :..      |.|||.|||.||||..:  |......|.||.|:  :|.||.|.||||:|.|.|.| 
Mouse   558 STSVGPQVKRADEWKDPWRRSKSPKKKLGVSVSPSRARRRRK--TSASSASASNSSRSSSRSSSY 620

  Fly   754 ---------SRSSSPSDHKRRYGSH-KLATATATSRRHGGRAARSPSQIPRRPRRTSKGSLSP-- 806
                     |||||.|.:..|...| ..:.:.:.||......:.||:..|.||...:||..:|  
Mouse   621 SGSGSSRSRSRSSSYSSYSSRSSRHSSFSGSRSRSRSFSSSPSPSPTPSPHRPPVRTKGEPAPPP 685

  Fly   807 ------SYKRPAVDKRGVGHSPSSKRKKLSSPAPKKFDKLRR-RRSSSSSDSDSSDTSYSDSESG 864
                  |.|:||....    .|.:.:.....|.|.|...||. ||....:.:.....:.|.|.||
Mouse   686 GKAGEKSIKKPAPPPA----PPQATKTTAPGPEPAKPGDLREARRKERQTRTPPRRRTLSGSGSG 746

  Fly   865 SSSSDSSSGSRETPQKRVRATDKALNERKLISKPAEQSTKKRSPISIEIKKTSNMVG--VSALAS 927
            |.||.|.|.||          .::|:    :|..:..|:...|..|:....:.:|..  .|.::|
Mouse   747 SGSSYSGSSSR----------SRSLS----VSSVSSVSSATSSSSSVHSVDSDDMYADLASPVSS 797

  Fly   928 ASNSADSDAEKDHDNGKDKEKDHVKEK-------------------------------------- 954
            ||:.:.:.|:...:.||.|::|.|:|:                                      
Mouse   798 ASSRSPTPAQTKKERGKSKKEDGVREEKRRRDPSAQPPKSSKAPAGGKASQQAAAPQPAVPGQPQ 862

  Fly   955 -------------------DKDCKEK----DKDKD-------------GMKD------------- 970
                               ||..:::    |||:.             |.:|             
Mouse   863 QGSFVAHKEIKLTLLNKAADKGSRKRYEPSDKDRQSPPAKKANLSPDRGSRDRKSGGRMGSPKPE 927

  Fly   971 ---------------------------------------------KEGKK---SRREELLKQLRA 987
                                                         |.||.   ||||||||||:|
Mouse   928 RQRGQNAKAPAAPADRKRPLSPQSKGSSKVTSVPGKATDTATAGTKSGKASTLSRREELLKQLKA 992

  Fly   988 VEDAIAKKRSKL 999
            ||||||:||:|:
Mouse   993 VEDAIARKRAKI 1004

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1677NP_572387.1 zf-CCCH_4 419..440 CDD:465626 14/44 (32%)
Zc3h18XP_006531532.1 zf-CCCH_4 254..299 CDD:465626 14/44 (32%)

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