DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9650 and ZNF235

DIOPT Version :9

Sequence 1:NP_001356899.1 Gene:CG9650 / 31660 FlyBaseID:FBgn0029939 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_004225.3 Gene:ZNF235 / 9310 HGNCID:12866 Length:738 Species:Homo sapiens


Alignment Length:519 Identity:121/519 - (23%)
Similarity:178/519 - (34%) Gaps:152/519 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   625 TSPGAGSTVNSSSPSPRQKQSPHFA----SPSPSQQQQQQLATIPRPHSLTPPEKLGDASSENGS 685
            ||..:|..|..|..:.:::...|..    |.|.:.|..|::.|..:|::.....|..:.||.   
Human   300 TSYSSGIPVQQSVRTGKKRYWCHECGKGFSQSSNLQTHQRVHTGEKPYTCHECGKSFNQSSH--- 361

  Fly   686 LGLILASTPRSASTPP----------SKTGDVSLQEPIAHC--------YSCSYCDKKFRFENNL 732
               :.|..|......|          |::.|:::     ||        |.|..|.|.|...::|
Human   362 ---LYAHLPIHTGEKPYRCDSCGKGFSRSTDLNI-----HCRVHTGEKPYKCEVCGKGFTQRSHL 418

  Fly   733 IIHQRTHTGEKPYKCTACD--FECSHIQKLMKHMRVHRSPADDQDNQDNQDDGSNADSLETNEAD 795
            ..|:|.|||||||||..|.  |.||  ..|..|.|||     .::.....|:.....||..|.  
Human   419 QAHERIHTGEKPYKCGDCGKRFSCS--SNLHTHQRVH-----TEEKPYKCDECGKCFSLSFNL-- 474

  Fly   796 NDEDPNPDESEEELGDGDNDPDGDGDLDGEDEDEDELEECEDMDYKAEDLSVSNRIDGKSQSPKT 860
                    .|.:.:..|:.                        .||.|:...........||.:.
Human   475 --------HSHQRVHTGEK------------------------PYKCEECGKGFSSASSFQSHQR 507

  Fly   861 TSSGATSLVGELMDKFGLSNIAQYSEAYKQALQESGRKEAAAAAAAAAAAADNNNRGGAGAPLSD 925
            ..:|.......:..| |.|. :.|.:|:::.  .:|.|                       |...
Human   508 VHTGEKPFRCNVCGK-GFSQ-SSYFQAHQRV--HTGEK-----------------------PYKC 545

  Fly   926 KLNGLPVAALRLRDEFAKNCNMFQQPQDGGAPSQVPLFNPFPNPFELSKRMKMDGGDWWGMSQA- 989
            ::.|       .|..::.|.:..|:...|..|.:..         |..|          |.||| 
Human   546 EVCG-------KRFNWSLNLHNHQRVHTGEKPYKCE---------ECGK----------GFSQAS 584

  Fly   990 -------LHRNEALFENLKLKPLGLGGANS-LIQGPLLKKESR----QRNDTCEFCGKVFKNCSN 1042
                   :|..|        ||........ ..|...|:...|    ::...|:.|||.|...||
Human   585 NLQAHQSVHTGE--------KPFKCDACQKRFSQASHLQAHQRVHTGEKPYKCDTCGKAFSQRSN 641

  Fly  1043 LTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRTGKDVYRCRFCDMPFSVPSTLEKHMR 1106
            |.||:..||||||:|||.|....:.|:.|:.|.:.|  ||:..|.|:.|...||..|....|.|
Human   642 LQVHQIIHTGEKPFKCEECGKEFSWSAGLSAHQRVH--TGEKPYTCQQCGKGFSQASHFHTHQR 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9650NP_001356899.1 zf-C2H2 717..739 CDD:333835 8/21 (38%)
C2H2 Zn finger 719..739 CDD:275368 7/19 (37%)
zf-H2C2_2 731..756 CDD:338759 15/26 (58%)
C2H2 Zn finger 747..767 CDD:275368 8/21 (38%)
zf-C2H2 1029..1050 CDD:333835 10/20 (50%)
C2H2 Zn finger 1030..1050 CDD:275368 10/19 (53%)
zf-H2C2_2 1042..1067 CDD:338759 14/24 (58%)
C2H2 Zn finger 1058..1078 CDD:275368 6/19 (32%)
C2H2 Zn finger 1088..1106 CDD:275368 6/17 (35%)
ZNF235NP_004225.3 KRAB A domain 6..47
KRAB 8..68 CDD:214630
KRAB 8..47 CDD:279668
KRAB B domain 48..80
C2H2 Zn finger 266..285 CDD:275368
COG5048 321..662 CDD:227381 102/453 (23%)
C2H2 Zn finger 321..341 CDD:275368 5/19 (26%)
zinc finger domain 321..341 5/19 (26%)
zf-H2C2_2 333..358 CDD:290200 5/24 (21%)
C2H2 Zn finger 349..369 CDD:275368 5/25 (20%)
zinc finger domain 349..369 5/25 (20%)
C2H2 Zn finger 377..397 CDD:275368 4/24 (17%)
zinc finger domain 377..397 4/24 (17%)
zf-H2C2_2 389..414 CDD:290200 8/29 (28%)
C2H2 Zn finger 405..425 CDD:275368 7/19 (37%)
zinc finger domain 405..425 7/19 (37%)
zf-H2C2_2 417..442 CDD:290200 14/24 (58%)
C2H2 Zn finger 433..453 CDD:275368 8/21 (38%)
zinc finger domain 433..453 8/21 (38%)
zf-H2C2_2 448..469 CDD:290200 5/25 (20%)
C2H2 Zn finger 461..481 CDD:275368 5/29 (17%)
zinc finger domain 461..481 5/29 (17%)
zf-H2C2_2 476..498 CDD:290200 5/45 (11%)
C2H2 Zn finger 489..509 CDD:275368 3/19 (16%)
zinc finger domain 489..509 3/19 (16%)
zf-H2C2_2 501..526 CDD:290200 5/25 (20%)
C2H2 Zn finger 517..537 CDD:275368 5/23 (22%)
zinc finger domain 517..537 5/23 (22%)
zf-H2C2_2 529..553 CDD:290200 7/55 (13%)
C2H2 Zn finger 545..565 CDD:275368 4/26 (15%)
zinc finger domain 545..565 4/26 (15%)
zf-H2C2_2 560..582 CDD:290200 6/40 (15%)
C2H2 Zn finger 573..593 CDD:275368 6/38 (16%)
zinc finger domain 573..593 6/38 (16%)
zf-H2C2_2 585..610 CDD:290200 4/32 (13%)
C2H2 Zn finger 601..621 CDD:275368 3/19 (16%)
zinc finger domain 601..621 3/19 (16%)
zf-H2C2_2 613..638 CDD:290200 7/24 (29%)
C2H2 Zn finger 629..649 CDD:275368 10/19 (53%)
zinc finger domain 629..649 10/19 (53%)
zf-H2C2_2 641..665 CDD:290200 14/23 (61%)
C2H2 Zn finger 657..677 CDD:275368 6/19 (32%)
zinc finger domain 657..677 6/19 (32%)
zf-H2C2_2 670..694 CDD:290200 9/25 (36%)
C2H2 Zn finger 685..705 CDD:275368 7/19 (37%)
zinc finger domain 685..705 7/19 (37%)
C2H2 Zn finger 713..733 CDD:275368
zinc finger domain 713..733
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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