DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cph and Sall2

DIOPT Version :10

Sequence 1:NP_001356899.1 Gene:Cph / 31660 FlyBaseID:FBgn0029939 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_056587.2 Gene:Sall2 / 50524 MGIID:1354373 Length:1004 Species:Mus musculus


Alignment Length:925 Identity:198/925 - (21%)
Similarity:329/925 - (35%) Gaps:232/925 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 QQQRENLASAMAAGMRHHPLLPPPEAMHANPFQLLRMPLPPALAQAGNVVPTVAPLFGRPSPADH 478
            |:...|.:::.|.....|......:..|:|         ||....:|...||..|          
Mouse    69 QENPSNSSASSAPRPEGHSRSQVMDTEHSN---------PPDSGSSGAPDPTWGP---------- 114

  Fly   479 YRMEQLVSEQFRHHGFNLAAAAAAAQAQFNANGQVVGGVVSGS----GEPRPPSSSSSGSQRGSV 539
            .|..:..|.||      |.||...|     |.|.  ||::..|    ..|.||.|:.:...    
Mouse   115 ERRGEESSGQF------LVAATGTA-----AGGG--GGLILASPKLGATPLPPESTPAPPP---- 162

  Fly   540 PPAALPPPSLSSQQQQ-----QQQQAVQQQQQQGAQQQLQSAQQQQQSQQQSQQQQQI------- 592
            ||...|||.:.|....     ::.:.:||:|          ..|.|.::|..:|...:       
Mouse   163 PPPPPPPPGVGSGHLNIPLILEELRVLQQRQ----------IHQMQMTEQICRQVLLLGSLGQTV 217

  Fly   593 ----TPGLVGGAGGSLKLEPQQMDFYSQRLRQLAGTTSPGAGSTVNSSSPSPRQ----------K 643
                :|..:.|.|.:...:|....|...:..|...|.:..:.|:.:|.:..|:|          .
Mouse   218 GAPASPSELPGTGAASSTKPLLPLFSPIKPAQTGKTLASSSSSSSSSGAEPPKQAFFHLYHPLGS 282

  Fly   644 QSP---------HFASPSPSQQ---QQQQLATIPRPHSLTPPEKLGDASSE--NGSLGLILASTP 694
            |.|         |..:|:||..   ...||  |..|| |..|...|..:::  ..:.||..|::|
Mouse   283 QHPFSVGGVGRSHKPTPAPSPALPGSTDQL--IASPH-LAFPGTTGLLAAQCLGAARGLEAAASP 344

  Fly   695 RSASTPPSKTGDV-------SLQEPIAHCYSCSYCDKKFRFENNLIIHQRTHTGEKPYKCTACDF 752
             ....|.:.:|::       ||::|... :.|.:|.|.|..::.|.||.|:||||:||||..|..
Mouse   345 -GLLKPKNGSGELGYGEVISSLEKPGGR-HKCRFCAKVFGSDSALQIHLRSHTGERPYKCNVCGN 407

  Fly   753 ECSHIQKLMKHMRVHR--------SPADDQDNQDNQDDGSNADSLETNEADNDEDPNPDESEEEL 809
            ..:....|..|...||        :|....::.|.        .:.::.........|:::|||.
Mouse   408 RFTTRGNLKVHFHRHREKYPHVQMNPHPVPEHLDY--------VITSSGLPYGMSVPPEKAEEEA 464

  Fly   810 GDGDNDPDGDGDLDGEDEDEDELEECEDMDYKAEDLSVSNRIDGKSQSPKTTSSGATSLVGELMD 874
            |    .|.|                    ..:.:.|..|......::|....|:|.::.|...:.
Mouse   465 G----TPGG--------------------GVERKPLVASTTALSATESLTLLSTGTSTAVAPGLP 505

  Fly   875 KFGLSNIAQYSEAYKQALQES--GRKEAAAAAAAAAAAADNNNRGGAGAPLSDKLNGLPVAALRL 937
            .|....:.:..|...:|.:.:  |.:.:|.|..|.:.:|..       ..||..:..||..|  |
Mouse   506 TFNKFVLMKAVEPKSKADENTPPGSEGSAIAGVADSGSATR-------MQLSKLVTSLPSWA--L 561

  Fly   938 RDEFAKNCNMFQQPQDGGAPSQVPLFNPFP--------NPFELSKRMKMDGGDWWGMSQALHRNE 994
            .....|:...|                |||        :|.|.||..:        :.:.:.|..
Mouse   562 LTNHLKSTGSF----------------PFPYVLEPLGASPSETSKLQQ--------LVEKIDRQG 602

  Fly   995 ALFENLKLKPLGLGGANSLIQGPLLKKESRQRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 1059
            |    :.:.....|...:....|   ..|....:.|..|.:|......|.:|...|.||:|:||:
Mouse   603 A----VAVASTASGAPTTSAPAP---SSSASGPNQCVICLRVLSCPRALRLHYGQHGGERPFKCK 660

  Fly  1060 LCSYACAQSSKLTRHMKTH--GRTGKDVYRCRFCDMPFSVPSTLEKHMRK----CVVNQGKAAAA 1118
            :|..|.:....|..|...|  ....:....|..|...|:...||::|:|.    .:.|.|.|.:.
Mouse   661 VCGRAFSTRGNLRAHFVGHKTSPAARAQNSCPICQKKFTNAVTLQQHVRMHLGGQIPNGGSALSE 725

  Fly  1119 ANAVAAAQAAQAAAQHIQAAAQQAQAVQAQAVQAQAAQQSQQQQQQLSPMGVVGYPPQFVSGHNL 1183
            ....|...:::.:......:..|.|:.|....:..:.::.:.::::           :.|:..: 
Mouse   726 GGGAAQENSSEQSTASGPGSFPQPQSQQPSPEEEMSEEEEEDEEEE-----------EDVTDED- 778

  Fly  1184 SLPG-----------SVSGDND--SNASSSM-TGV-HPISLKEEAXLFSGFPVP---LAPPPPLQ 1230
            ||.|           ||.||::  |.|...: |.| .|.::||   :.|....|   |.||||..
Mouse   779 SLAGRGSESGGEKAISVRGDSEEVSGAEEEVATSVAAPTTVKE---MDSNEKAPQHTLPPPPPPP 840

  Fly  1231 QHQPHLQQPQQQQTS 1245
            .:..| .||.:|.||
Mouse   841 DNLDH-PQPMEQGTS 854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CphNP_001356899.1 zf-C2H2 717..739 CDD:395048 8/21 (38%)
C2H2 Zn finger 719..739 CDD:275368 8/19 (42%)
zf-H2C2_2 731..756 CDD:463886 13/24 (54%)
C2H2 Zn finger 747..767 CDD:275368 4/19 (21%)
zf-C2H2 1029..1050 CDD:395048 5/20 (25%)
C2H2 Zn finger 1030..1050 CDD:275368 5/19 (26%)
zf-H2C2_2 1042..1067 CDD:463886 10/24 (42%)
C2H2 Zn finger 1058..1078 CDD:275368 5/19 (26%)
C2H2 Zn finger 1088..1106 CDD:275368 6/17 (35%)
Sall2NP_056587.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..122 13/71 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 137..177 13/45 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 220..270 9/49 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 285..307 5/21 (24%)
SUF4-like 371..458 CDD:411020 23/95 (24%)
C2H2 Zn finger 374..395 CDD:411020 8/20 (40%)
C2H2 Zn finger 374..394 CDD:275368 8/19 (42%)
C2H2 Zn finger 402..422 CDD:411020 4/19 (21%)
C2H2 Zn finger 402..422 CDD:275368 4/19 (21%)
C2H2 Zn finger 631..651 CDD:275368 5/19 (26%)
zf-C2H2 657..679 CDD:395048 6/21 (29%)
C2H2 Zn finger 659..679 CDD:275368 5/19 (26%)
zf-C2H2 690..711 CDD:395048 7/20 (35%)
C2H2 Zn finger 691..711 CDD:275368 7/19 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 712..910 35/159 (22%)
zf-C2H2_6 910..932 CDD:433576
C2H2 Zn finger 910..930 CDD:275370
C2H2 Zn finger 939..956 CDD:275370
Blue background indicates that the domain is not in the aligned region.

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