DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9650 and salr

DIOPT Version :9

Sequence 1:NP_001356899.1 Gene:CG9650 / 31660 FlyBaseID:FBgn0029939 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_001245983.1 Gene:salr / 34568 FlyBaseID:FBgn0000287 Length:1267 Species:Drosophila melanogaster


Alignment Length:1443 Identity:291/1443 - (20%)
Similarity:424/1443 - (29%) Gaps:538/1443 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 KVLQCNKENYGQCATQNPQMDRDA---------------EEGRP--------LSLVNRRPSISAP 96
            |.|..:..|.|    ..|||:.:|               ||..|        |||::.....|.|
  Fly    48 KELDADSNNNG----TEPQMEAEAVPESDTERETAEERGEEQEPENSNEALDLSLISSGGRESLP 108

  Fly    97 ISGRKSAPASAAAAVAAAAAAAAAAAAASSTASGSRIHTPPPSPADLLADGASST---------- 151
            .||..|..|.....||.|..||.|.|....:|..:.:               .||          
  Fly   109 GSGHVSLEALQHTKVAVAQFAATAMAGNHQSADLAMV---------------QSTIFNVQRQHLM 158

  Fly   152 PKRLVDENDNTTPKDSETGATTLDSNAAPSSPAAIERQSSGDSSCEMEEQQDRQDKQSQPKQAKV 216
            ..:|:..               |.|....:..||:.|.|..|.  |.||.:...:.:.||... :
  Fly   159 QLQLIQH---------------LQSQLKRAEAAALGRHSHSDE--EEEEPEPEPEPKKQPTNG-L 205

  Fly   217 KQEPYDEEGVNHHQNQDDDDDEEMEERSLAKRPKMELVDAEANTVHTEPSNYTCSTCKTRYTSAW 281
            |:|...|:|....|:|:...:|.      :|..|....|.:|     ||..|....|....:.|.
  Fly   206 KEELELEQGPESEQDQESRREEN------SKTDKRGTEDRKA-----EPEGYQSMMCDISSSLAS 259

  Fly   282 RLIQHVQHSHGVKIYVESPGGGATLTVATPAALNNSALALAAAAAAASASGLASPQPAVSPNPAV 346
            .:|.    :|........|.....|...|...|::::.:|.||......|..||.: |.|.....
  Fly   260 SIIT----NHDPPPAPNEPNCLEMLQRRTEEVLDSASQSLHAAQMQEEYSEYASKE-AQSRGEIF 319

  Fly   347 TSSAKRSSPLGAAGSTILSTSVSSTCSNSLV-NTSGGSISNTSSIGSPQQQQLQLQQQQAQQQQQ 410
            ....|....:..:.|.:.....|.|.....| |..|...:...::                    
  Fly   320 KHRCKYCGKIFGSYSALQIHLRSHTGERPFVCNVCGSKFTTKGNL-------------------- 364

  Fly   411 RVQQQQRENLASAMAAGMRHHPLLPPPEAMHANPFQLLRMPLPPALAQAGNVVPTVAPLFGRPSP 475
            :|..|             ||..:.||             |.|||.          |||..|    
  Fly   365 KVHYQ-------------RHTQIFPP-------------MLLPPG----------VAPNVG---- 389

  Fly   476 ADHYRMEQLVSEQFRHHGFNLAAAAAAAQAQFNANGQVVGGVVSGSGEPRPPSSSSSGSQRGSVP 540
                           |.|                .|||                      :|...
  Fly   390 ---------------HSG----------------QGQV----------------------QGEQY 401

  Fly   541 PAALP--PPSLSSQQQQQQQQA-----VQQQQQQGAQQQLQSAQQQQQSQQQSQQQQQITPGLV- 597
            |..||  ||.....|:|.|.|.     ::|:......:.|.....:::.:..|..::..||..| 
  Fly   402 PIRLPFAPPVAPVGQEQHQNQVEEPEEIRQEIPVPQAEDLSKPMVKEKEKSHSPVERVKTPKEVK 466

  Fly   598 --GGAGGSLKLEPQQMDFYSQRLRQLAGTTSPGAGST--VNSSSPSPRQK-------QSPHFAS- 650
              .....|.|.|        :.:.:...|:|...||.  ..:|:.||.|:       :..|.|. 
  Fly   467 TDAALPSSEKPE--------KEISKPVVTSSRRNGSVRKRQTSAVSPPQEDRERDLVEHLHIAKL 523

  Fly   651 ---PSPSQQQQQQLATIPRPHSLTPPEKLGDASSENGSLGLILASTPRSASTPPSKTGDVSLQEP 712
               .|.|::.|      |..:||...|::.|.|.|:      |....:::.|...:....:::..
  Fly   524 VRRSSASRESQ------PAEYSLAQMERIIDKSWED------LIEIDKTSETSKLQQLVDNIENK 576

  Fly   713 IAHCYSCSYCDKKFRFENNLIIHQRTHTGEKPYKCTAC-------------------------DF 752
            :.....|.:|.|.....::|.:|.||||||:|::|..|                         .|
  Fly   577 LTDPNQCIFCQKVMSCRSSLQMHIRTHTGERPFRCKICGRAFATKGNLKAHMSIHKIKPPMRSQF 641

  Fly   753 EC--SHIQK------LMKHMRVHRSPADDQDNQDNQDDGSNADSLETNEAD--NDEDPNPDESEE 807
            :|  .| ||      |.:|:|:|        ..|:...|..|.:....||:  ..||.|   |.:
  Fly   642 KCPVCH-QKFSNGIILQQHIRIH--------TMDDGSGGQGAPAANPGEAERLGIEDQN---SNK 694

  Fly   808 ELGDGD-----------------NDPDGDGD----LDGEDEDEDE----------LEECEDMDYK 841
            .||..|                 :...||.|    :|..|:..|.          ||...|.:.:
  Fly   695 SLGTSDTLDFSTTISDHSGQRSESSQGGDFDEFMTMDSTDDSRDNSSAATATPHPLERERDREKE 759

  Fly   842 AEDLSVSNRIDGKSQS-PKTTSSGATSLVGELMDKFGLSNIAQYSEAYKQALQESGRKEAAAAAA 905
            .|....::..|.:|.| |..|  |..|..|| |....||:.:          ..|||..|...|.
  Fly   760 RERRIPNDCSDERSHSNPDLT--GGRSESGE-MPAMDLSSPS----------SNSGRIFATGLAN 811

  Fly   906 AAAAAADNNNRGG---AGAPLSDKLNGLPVAALR------------------------------- 936
            .||.....|  ||   .|.|:...|  |.:||.|                               
  Fly   812 GAAGGGSGN--GGLPMLGMPMPPNL--LLMAAAREEMHALGHAHAKFPLLPFGPLGFMGLHPPPN 872

  Fly   937 ------------------LRDEFAKN--CNMFQQPQ--DGGAP---------------------- 957
                              |:.|.||.  ....|:||  |.|:|                      
  Fly   873 VCNLCFKMLPSLAALESHLQSEHAKEPATGHAQRPQCSDAGSPYGAKLTLNPNLFAKKPPSSSSS 937

  Fly   958 --------SQVPLF---NPFPNPFE-----------------------LSKRMKMDGGDWWGMSQ 988
                    |..|.|   ||...|.:                       .:.....:.||   ..|
  Fly   938 SSGEKLPESSNPPFPAENPPATPIKEDPDQEQLMVEEGASAGEGSGTGATSNYPQEAGD---AEQ 999

  Fly   989 ALHRNEALFENLKLKPL-------GLGGANSLIQGPLLKKESRQRNDTCEFCGKVFKNCSNLTVH 1046
            :|.:.:.........||       ..|...|.:..|:..|.      .|..|.:.|.:.|.|.:|
  Fly  1000 SLMKMQLHAHRFPASPLDFQQALMSAGPPTSSLDPPVNNKH------FCHVCRRNFSSSSALQIH 1058

  Fly  1047 RRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRTGKDVYRCRFCDMPFSVPSTLEKHMRKCVVN 1111
            .|:|||:||::|.:|..|......|..||.||..|.....|.|        ..:||..||. ..|
  Fly  1059 MRTHTGDKPFQCNVCQKAFTTKGNLKVHMGTHMWTNPTSRRGR--------RMSLELPMRP-GPN 1114

  Fly  1112 QGKAAAAANAVAAAQAAQAAAQHIQAAAQQAQAVQAQAVQAQAAQQSQQQQQ------------- 1163
            .|                                  |.....:|:|...|::             
  Fly  1115 SG----------------------------------QGHPGSSAEQEFMQRRPELFFPYLPPFFN 1145

  Fly  1164 -------QLSPMGVVGY-PPQFVSGHNLSLPGSVSGDNDSNASSSMTGVHPISLKEEAXLFSGFP 1220
                   :|||...... ||.|.:|.....|..:.|      .......||..|:..: ..|..|
  Fly  1146 GLPPKPGELSPGAFPNIPPPPFANGGKYPYPPGLLG------FPGFLAQHPYILERRSSSKSPTP 1204

  Fly  1221 VPLAPPPPLQQHQ 1233
            .| |..|.|::.:
  Fly  1205 EP-AQSPALREEE 1216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9650NP_001356899.1 zf-C2H2 717..739 CDD:333835 6/21 (29%)
C2H2 Zn finger 719..739 CDD:275368 6/19 (32%)
zf-H2C2_2 731..756 CDD:338759 13/51 (25%)
C2H2 Zn finger 747..767 CDD:275368 10/52 (19%)
zf-C2H2 1029..1050 CDD:333835 7/20 (35%)
C2H2 Zn finger 1030..1050 CDD:275368 7/19 (37%)
zf-H2C2_2 1042..1067 CDD:338759 11/24 (46%)
C2H2 Zn finger 1058..1078 CDD:275368 6/19 (32%)
C2H2 Zn finger 1088..1106 CDD:275368 3/17 (18%)
salrNP_001245983.1 zf-C2H2 321..343 CDD:278523 2/21 (10%)
C2H2 Zn finger 323..343 CDD:275368 2/19 (11%)
zf-H2C2_2 335..360 CDD:290200 5/24 (21%)
C2H2 Zn finger 351..371 CDD:275368 4/52 (8%)
C2H2 Zn finger 583..603 CDD:275368 6/19 (32%)
zf-H2C2_2 595..620 CDD:290200 11/24 (46%)
C2H2 Zn finger 611..631 CDD:275368 2/19 (11%)
C2H2 Zn finger 643..663 CDD:275368 7/20 (35%)
lambda-1 1013..>1061 CDD:212564 12/53 (23%)
zf-C2H2 1040..1062 CDD:278523 7/27 (26%)
C2H2 Zn finger 1042..1062 CDD:275368 7/19 (37%)
zf-H2C2_2 1054..1079 CDD:290200 11/24 (46%)
C2H2 Zn finger 1070..1090 CDD:275368 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447775
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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