DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9650 and Bcl11b

DIOPT Version :9

Sequence 1:NP_001356899.1 Gene:CG9650 / 31660 FlyBaseID:FBgn0029939 Length:1254 Species:Drosophila melanogaster
Sequence 2:XP_038968327.1 Gene:Bcl11b / 314423 RGDID:1311128 Length:884 Species:Rattus norvegicus


Alignment Length:1183 Identity:311/1183 - (26%)
Similarity:418/1183 - (35%) Gaps:478/1183 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 DILTCGACQKAFALSDIVKFIQHKVLQCNKENYGQCATQNPQMDRDAEEGRPLSLVNRRPSISAP 96
            |:||||.||..|.|.||:.||:||..||.  ..|.|      .|:..::|.|             
  Rat    54 DLLTCGQCQMNFPLGDILVFIEHKKKQCG--GLGSC------YDKVLDKGSP------------- 97

  Fly    97 ISGRKSAPASAAAAVAAAAAAAAAAAAASSTASGSRIHTPPPSPADL------LADGASSTPKRL 155
                                                   ||.|.::|      :..|...||   
  Rat    98 ---------------------------------------PPSSRSELRRVSEPVEIGIQVTP--- 120

  Fly   156 VDENDN-------TTPKDSETGATTLDSNAAPSSPAAIERQSSGDSSCEMEEQQDRQDKQSQPKQ 213
             ||:|:       ..||.        ::.|.|..||.:...:...:|            .|.| .
  Rat   121 -DEDDHLLSPTKGICPKQ--------ENIAGPCRPAQLPSMAPIAAS------------SSHP-P 163

  Fly   214 AKVKQEPYDEEGV-----------NHHQNQDDDDDEEMEERSLAKRPKMELVDAEANTVHTEPSN 267
            ..|...|....||           ....:.|....|...|.....:.::...|        |||:
  Rat   164 TSVITSPLRALGVLPPCFPLPCCGARPISGDGTQGEGQMEAPFGCQCELSGKD--------EPSS 220

  Fly   268 YTCSTCKTRYTSAWRLIQHVQHSHGVKIYVESPGGGATLTVATPAALNNSALALAAAAAAASASG 332
            |.|:|||..:.|||.|:||.|::||.:||:|                                  
  Rat   221 YICTTCKQPFNSAWFLLQHAQNTHGFRIYLE---------------------------------- 251

  Fly   333 LASPQPAVSPNPAVTSSAKRSS---PLGAAGSTILSTSVSSTCSNSLVNTSGGSISNTSSIGSPQ 394
                     |.||.||...|.:   |||.          .:...:.|:|..|.|           
  Rat   252 ---------PGPASTSLTPRLTIPPPLGP----------EAVAQSPLMNFLGDS----------- 286

  Fly   395 QQQLQLQQQQAQQQQQRVQQQQRENLASAMAAGMRHHPLLPPPEAMHANPFQLLRMPLP-----P 454
                                                            |||.||||..|     |
  Rat   287 ------------------------------------------------NPFNLLRMTGPILRDHP 303

  Fly   455 ALAQAGNVVPTVAPLFGRPSPADHYRMEQLVSEQFRHHGFNLAAAAAAAQAQFNANGQVVGGVVS 519
            ...:..  :|...|||..|.               |||                           
  Rat   304 GFGEGR--LPGTPPLFSPPP---------------RHH--------------------------- 324

  Fly   520 GSGEPRPPSSSSSGSQRGSVPPAALPPPSLSSQQQQQQQQAVQQQQQQGAQQQLQSAQQQQQSQQ 584
                                    |.|..||:             ::.|...|..||        
  Rat   325 ------------------------LDPHRLSA-------------EEMGLVAQHPSA-------- 344

  Fly   585 QSQQQQQITPGLVGGAGGSLKLEPQQMDFYSQRLRQLAGTT------SPGAGS----TVNSSSPS 639
             ..:..::.|         :.::...||| |:|||:|||.:      |||.|:    .:|...||
  Rat   345 -FDRVMRLNP---------MAIDSPAMDF-SRRLRELAGNSSTPPPVSPGRGNPMHRLLNPFQPS 398

  Fly   640 PRQKQSPHFASPSPSQQQQQQLATIPRPHSLTPPEKLGDASSENGSLGLILASTPRSASTPPSKT 704
            |:   ||..::|             |.|                          |....|||   
  Rat   399 PK---SPFLSTP-------------PLP--------------------------PMPTGTPP--- 418

  Fly   705 GDVSLQEPIAHCYSCSYCDKKFRFENNLIIHQRTHTGEKPYKCTACDFECSHIQKLMKHMRVHRS 769
                 .:|.|...||.:|.|.|:|::|||:|:|:|||||||||..||..||...||.:||:.|..
  Rat   419 -----PQPPAKSKSCEFCGKTFKFQSNLIVHRRSHTGEKPYKCQLCDHACSQASKLKRHMKTHMH 478

  Fly   770 PADDQDNQDNQDDGSNADSLETNEADNDEDPNPDESE----EELGDGD-NDPDGDGDLDGE-DED 828
            .|.....:  .|||.:|.|          .|.|..||    .:..||| ...:.|..|..| ::|
  Rat   479 KAGSLAGR--SDDGLSAAS----------SPEPGTSELPGDLKAADGDFRHHESDPSLGPEPEDD 531

  Fly   829 EDELEECEDMDYKAEDLSVSN----------RIDGKSQSPKTTSSGATS---------LVGELMD 874
            |||.||.|::..:.|....|:          |.:|....|....:||.:         .:|::|:
  Rat   532 EDEEEEEEELLLENESRPESSFSMDSELGRGRENGGGVPPGVAGAGAAAAALADEKALALGKVME 596

  Fly   875 KFGLSNIAQYSEAYKQALQESGRKEAAAAAAAAAAAADN--NNRGGAGAPLSDKLNGL------P 931
            ..||..:.||.|.....|:.:|......|.....|.|..  |.||||.||.::....|      |
  Rat   597 DAGLGALPQYGEKRGAFLKRAGDAGDTGAGGCGDAGAPGAVNGRGGAFAPGAEPFPALFPRKPAP 661

  Fly   932 V-----------AALRLRDE---------FAKNCNMFQQPQDGGAPSQVPLFNPF-------PNP 969
            :           ||.|::.|         ...:.|::.|...|.|.|:..:.:||       .:|
  Rat   662 LPSPGLGGPALHAAKRIKVEKDLELPPAALIPSENVYSQWLVGYAASRHFMKDPFLGFTDARQSP 726

  Fly   970 FELSKRMKMDGGDWWGMSQALHRNEALFENLKLKP-LGLGGANSLIQGP----LLKKESRQRNDT 1029
            |..|.....:.|   .:..:....:.|...|..:. ...||:...:.||    ...||.| |:||
  Rat   727 FATSSEHSSENG---SLRFSTPPGDLLDGGLSGRSGTASGGSTPHLGGPGPGRPSSKEGR-RSDT 787

  Fly  1030 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRTGKDVYRCRFCDMP 1094
            ||:|||||||||||||||||||||:|||||||:|||||||||||||||||:.||:||||..|.||
  Rat   788 CEYCGKVFKNCSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHMKTHGQIGKEVYRCDICQMP 852

  Fly  1095 FSVPSTLEKHMRK 1107
            |||.|||||||:|
  Rat   853 FSVYSTLEKHMKK 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9650NP_001356899.1 zf-C2H2 717..739 CDD:333835 11/21 (52%)
C2H2 Zn finger 719..739 CDD:275368 10/19 (53%)
zf-H2C2_2 731..756 CDD:338759 17/24 (71%)
C2H2 Zn finger 747..767 CDD:275368 9/19 (47%)
zf-C2H2 1029..1050 CDD:333835 19/20 (95%)
C2H2 Zn finger 1030..1050 CDD:275368 18/19 (95%)
zf-H2C2_2 1042..1067 CDD:338759 22/24 (92%)
C2H2 Zn finger 1058..1078 CDD:275368 18/19 (95%)
C2H2 Zn finger 1088..1106 CDD:275368 13/17 (76%)
Bcl11bXP_038968327.1 zf-C2H2 427..448 CDD:395048 11/20 (55%)
C2H2 Zn finger 428..448 CDD:275370 10/19 (53%)
zf-H2C2_2 440..465 CDD:404364 17/24 (71%)
C2H2 Zn finger 456..476 CDD:275370 9/19 (47%)
zf-C2H2 787..808 CDD:395048 19/20 (95%)
C2H2 Zn finger 788..808 CDD:275368 18/19 (95%)
zf-H2C2_2 800..825 CDD:404364 22/24 (92%)
C2H2 Zn finger 816..836 CDD:275368 18/19 (95%)
C2H2 Zn finger 846..864 CDD:275368 13/17 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 141 1.000 Domainoid score I4601
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 373 1.000 Inparanoid score I2044
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D121311at33208
OrthoFinder 1 1.000 - - FOG0002010
OrthoInspector 1 1.000 - - otm46020
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45993
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1492
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.160

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