DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cph and znf217

DIOPT Version :10

Sequence 1:NP_001356899.1 Gene:Cph / 31660 FlyBaseID:FBgn0029939 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_001338569.1 Gene:znf217 / 100537540 ZFINID:ZDB-GENE-030131-2542 Length:950 Species:Danio rerio


Alignment Length:721 Identity:141/721 - (19%)
Similarity:236/721 - (32%) Gaps:232/721 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   622 AGTTSPGAGSTV--------------NSSSPSP----------RQKQSPHFASPSPSQQQQQQLA 662
            :..:.||.||::              .||.|..          ::...||..|..|:......:.
Zfish    24 SSASMPGTGSSMTPHASLVEKPGILAESSLPLDCMFCEETFLHQEDLGPHLLSQHPTTFHGPAVL 88

  Fly   663 TIPRPHSLTPPEKLGDASSENGSLGLILASTPRSASTPPSKTGDVSLQEPIAHCYSCSYCDKKFR 727
            .: ....|||    ||.:              ||.:.|.     |...|.:    ||:.|.:..:
Zfish    89 RV-EAEFLTP----GDRA--------------RSKTCPA-----VEKNEEL----SCAVCGQAIK 125

  Fly   728 FENNLIIHQRTHTGEKPYKCTACDFECSHIQKLMKHMRVHRSPADDQDNQDNQDDGSNADSLETN 792
            ....|..|.|.|.....|.|:.|.........|..|||.|........|.:.:...:      .|
Zfish   126 DATELETHMRKHKDSFTYCCSICGRRFKEPWFLKNHMRTHGKTGSKSKNHELEIPAT------VN 184

  Fly   793 EADNDEDPNP--------------DESEEELGD----GDNDPDGDGDLDGEDEDEDEL------- 832
            :...|:.|:|              ..::|.|.:    .:.|.:.|.::...|:..:||       
Zfish   185 DVIQDQPPSPVVTSYKMCMVCGFFFHNKEALAEHSKVHNRDAEADENISTHDQPAEELPVSQHAF 249

  Fly   833 -----------EECE----------DMD----YK----------------AEDLSVSNRIDGKSQ 856
                       .|.|          .:|    |:                |::|:..:..|.:..
Zfish   250 LQNLQLHPSVAREAEPKHPTGRWISQLDPFNTYQAWQLATRGKIAAGPNLAKELNADSNSDNEDS 314

  Fly   857 SPKTTSSGATSLVGELMDKFGLSNIAQYSEAYKQALQESG--RKEAAAAAAAAA----------- 908
            ..:....||....|:...:.||.:..:.|:....:.::.|  ||:.........           
Zfish   315 GSEKEELGAIWASGDKPARRGLRSELKPSDTPSPSPEQKGLIRKDKPTNCEECGKIFRTYHQLVL 379

  Fly   909 -AAADNNNRGGAGAPL------SDKLNGLPVAALRLRDEFAKNCNMFQQPQDG---GAPSQVPLF 963
             :......||||.:|.      :..:.....::|...||::         :||   |.|  |..|
Zfish   380 HSRIHKKERGGAESPTTPVDGRAQSVGSCSSSSLDRADEYS---------EDGSEEGVP--VDAF 433

  Fly   964 NPFPNPFELSKRMKMDGGDWWGMSQALHRNEALFENLKLKPLGLGGANSLIQGPLLKKESRQRND 1028
            ||          .|::.|                                 ||.:..|....|. 
Zfish   434 NP----------DKLEDG---------------------------------QGKMKLKILAPRK- 454

  Fly  1029 TCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRTGKDVYRCRFCDM 1093
             |.:|||.|::...|.:|.|:||||||||||.|.||.||.:.|..|:   .|..||.   .|.::
Zfish   455 -CNYCGKTFRSNYYLNIHLRTHTGEKPYKCEYCDYAAAQKTSLRYHL---DRRHKDK---PFTEI 512

  Fly  1094 PFSVPST-LEKHMRKCV-----VNQGKAAAAANAVAAAQAAQAAAQHIQAAAQQAQAVQAQAVQA 1152
            | ::|:| ..:::.|.:     |:..:|:.......|.:...|:.:|....:|         |..
Zfish   513 P-NIPATPSARNIIKAIEPPKNVDNKQASKPPKQWLAPKPLPASVKHELGTSQ---------VIK 567

  Fly  1153 QAAQQSQQQQQQLSPMGVVGYPPQFVSGHNLSLPGSVSGDNDSNASSSMTGVHPISLKEEAXL-F 1216
            ..:...|.:|:.:|......|.|.........||.::..: :..||.:     |::|..:. | .
Zfish   568 STSPSIQVKQEFVSSPVATPYTPLSEDNKKYPLPANLKME-EKEASEA-----PLNLSLKVSLSI 626

  Fly  1217 SGFPVP 1222
            |...||
Zfish   627 SATSVP 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CphNP_001356899.1 zf-C2H2 717..739 CDD:395048 6/21 (29%)
C2H2 Zn finger 719..739 CDD:275368 5/19 (26%)
zf-H2C2_2 731..756 CDD:463886 7/24 (29%)
C2H2 Zn finger 747..767 CDD:275368 6/19 (32%)
zf-C2H2 1029..1050 CDD:395048 8/20 (40%)
C2H2 Zn finger 1030..1050 CDD:275368 8/19 (42%)
zf-H2C2_2 1042..1067 CDD:463886 16/24 (67%)
C2H2 Zn finger 1058..1078 CDD:275368 9/19 (47%)
C2H2 Zn finger 1088..1106 CDD:275368 4/18 (22%)
znf217NP_001338569.1 C2H2 Zn finger 117..137 CDD:275368 5/19 (26%)
zf-C2H2 143..165 CDD:395048 7/21 (33%)
C2H2 Zn finger 145..165 CDD:275368 6/19 (32%)
C2H2 Zn finger 202..222 CDD:275368 2/19 (11%)
C2H2 Zn finger 364..384 CDD:275368 0/19 (0%)
zf-C2H2 454..475 CDD:395048 8/22 (36%)
C2H2 Zn finger 455..475 CDD:275368 8/19 (42%)
zf-H2C2_2 467..492 CDD:463886 16/24 (67%)
zf-H2C2_5 481..505 CDD:404746 12/26 (46%)
C2H2 Zn finger 483..504 CDD:275368 10/23 (43%)

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