DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fz4 and Fzd2

DIOPT Version :9

Sequence 1:NP_511068.2 Gene:fz4 / 31659 FlyBaseID:FBgn0027342 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_742032.2 Gene:Fzd2 / 64512 RGDID:71012 Length:570 Species:Rattus norvegicus


Alignment Length:589 Identity:162/589 - (27%)
Similarity:251/589 - (42%) Gaps:112/589 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLVVILLHPRISKSSTSGNPSASSSSSSPPEIPAFRQCETIRIEMCRKIGYNETSMPNLVGNEMQ 73
            ||:.:||.|....:...|....|        ||....|:.|.|.:|..|.||:|.||||:|:..|
  Rat    15 LLLPLLLLPAAGPAQFHGEKGIS--------IPDHGFCQPISIPLCTDIAYNQTIMPNLLGHTNQ 71

  Fly    74 TDVEYTLQTFAPLIEYDCSSQLKLFLCAAYVPMCTPKAPVHAIGPCRSLCESVRIRCHPVLQGFG 138
            .|....:..|.||::..||.:|:.|||:.|.|:||  ....||.||||:||..|..|..::..||
  Rat    72 EDAGLEVHQFYPLVKVQCSPELRFFLCSMYAPVCT--VLEQAIPPCRSICERARQGCEALMNKFG 134

  Fly   139 FPWPPALDCDKFPRENNHETMCMEGPGELHQPQQEQDLY------GL-PGQ-GIPGGLGG----- 190
            |.||..|.|:.||| :..|.:|:   |:.|.......|.      || ||. |.|||.||     
  Rat   135 FQWPERLRCEHFPR-HGAEQICV---GQNHSEDGTPALLTTAPPSGLQPGAGGTPGGPGGGGAPP 195

  Fly   191 -----KLPMDCSGLAK--SHLYVRLPRSGRCAPLCE-----ADILFTPAEKHLAEIWVSTWAYAA 243
                 :.|..|..:.|  |:|..:......||..||     ..:.|:..|...|.:|:.||:...
  Rat   196 RYATLEHPFHCPRVLKVPSYLSYKFLGERDCAAPCEPARPDGSMFFSQEETRFARLWILTWSVLC 260

  Fly   244 LGLALVATVCLLASDGSRLASAKWSRLLSPLIW---CHNMVTLGWAVRFMVGRTGTACGTDPQAP 305
            .. :...||.....|..|....:     .|:|:   |:.||::.:...|:: :....|       
  Rat   261 CA-STFFTVTTYLVDMQRFRYPE-----RPIIFLSGCYTMVSVAYIAGFVL-QERVVC------- 311

  Fly   306 NESL------LTVDGLSNASCASVFLMRYYFGMAACAWWAVLCLGWHRDIRRHSPDSK-GHVVIP 363
            ||..      ..|.|.....|..:|:|.|:|.||:..||.:|.|.|..     :...| ||..|.
  Rat   312 NERFSEDGYRTVVQGTKKEGCTILFMMLYFFSMASSIWWVILSLTWFL-----AAGMKWGHEAIE 371

  Fly   364 SNFGGSPAKRNSAKTAQQDLTQNNFVCFVAWGLPAFQTSAVIVARFVDADELLGACFVGNQSDKA 428
            :|                    :.:....||.:||.:|..::....:|.|.|.|.||||..|...
  Rat   372 AN--------------------SQYFHLAAWAVPAVKTITILAMGQIDGDLLSGVCFVGLNSLDP 416

  Fly   429 LQILVATPVFCYWIFGSMNLISGYLVHCRTKEILRNSNALSVQQQLQQLSAHSSSGIGIFLFIYG 493
            |:..|..|:|.|...|:..|::|::...|.:.|:::....:  ::|::|...    ||:|..:|.
  Rat   417 LRGFVLAPLFVYLFIGTSFLLAGFVSLFRIRTIMKHDGTKT--EKLERLMVR----IGVFSVLYT 475

  Fly   494 LACAMLLLAVIYEFANIDVWLGSGDTN-------------TP-LWP----FLLRAFMELMLGICC 540
            :...:::....||.|..:.|..|..:.             || :.|    ::::..|.|::||..
  Rat   476 VPATIVIACYFYEQAFREHWERSWVSQHCKSLAIPCPAHYTPRMSPDFTVYMIKYLMTLIVGITS 540

  Fly   541 FAWV 544
            ..|:
  Rat   541 GFWI 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz4NP_511068.2 CRD_FZ4 43..169 CDD:143557 51/125 (41%)
7tm_4 223..544 CDD:304433 80/348 (23%)
Fzd2NP_742032.2 CRD_FZ2 40..166 CDD:143573 52/131 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..194 11/27 (41%)
7tmF_FZD2 239..568 CDD:320373 81/351 (23%)
TM helix 1 249..273 CDD:320373 6/24 (25%)
TM helix 2 282..303 CDD:320373 5/25 (20%)
TM helix 3 333..355 CDD:320373 9/21 (43%)
TM helix 4 376..392 CDD:320373 5/15 (33%)
TM helix 5 414..437 CDD:320373 6/22 (27%)
TM helix 6 468..490 CDD:320373 5/21 (24%)
TM helix 7 519..544 CDD:320373 5/24 (21%)
Lys-Thr-X-X-X-Trp motif, mediates interaction with the PDZ domain of Dvl family members. /evidence=ECO:0000250 548..553
PDZ-binding 568..570
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.