DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fz4 and Fzd1

DIOPT Version :10

Sequence 1:NP_511068.2 Gene:fz4 / 31659 FlyBaseID:FBgn0027342 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_067089.2 Gene:Fzd1 / 58868 RGDID:61916 Length:642 Species:Rattus norvegicus


Alignment Length:639 Identity:165/639 - (25%)
Similarity:259/639 - (40%) Gaps:130/639 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LCLLVVILLHPRI--SKSSTSGNPSASSSSSSPP----------------EIPAFRQCETIRIEM 53
            |.||:.:|..|.:  .::..:|..|.....:.||                .||....|:.|.|.:
  Rat    54 LLLLLWLLEAPLLLGVRAQAAGQVSGPGQQAPPPPQPQQGGQQYNGERGISIPDHGYCQPISIPL 118

  Fly    54 CRKIGYNETSMPNLVGNEMQTDVEYTLQTFAPLIEYDCSSQLKLFLCAAYVPMCTPKAPVHAIGP 118
            |..|.||:|.||||:|:..|.|....:..|.||::..||::||.|||:.|.|:||  ....|:.|
  Rat   119 CTDIAYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSAELKFFLCSMYAPVCT--VLEQALPP 181

  Fly   119 CRSLCESVRIRCHPVLQGFGFPWPPALDCDKFPRENNHETMCMEGPGELHQPQQEQDLYGLPGQ- 182
            ||||||..|..|..::..|||.||..|.|:|||         :.|.|||...|...| .|.|.. 
  Rat   182 CRSLCERARQGCEALMNKFGFQWPDTLKCEKFP---------VHGAGELCVGQNTSD-KGTPTPS 236

  Fly   183 -------------------GIPGGLG----GKLPMDCSGLAKSHLYVRLPRSGRCAPLCEAD--- 221
                               |.|||.|    ||.....:....|:|.........|...||..   
  Rat   237 LLPEFWTSNPQHGGGGYRGGYPGGAGPVERGKFSCPRALRVPSYLNYHFLGEKDCGAPCEPTKVY 301

  Fly   222 --ILFTPAEKHLAEIWVSTWAYAALGLALVATVCLLASDGSRLASAKWSRLLSPLIW---CHNMV 281
              :.|.|.|...:..|:..|:.......|...:..|..      ..::|....|:|:   |:..|
  Rat   302 GLMYFGPEELRFSRTWIGIWSVLCCASTLFTVLTYLVD------MRRFSYPERPIIFLSGCYTAV 360

  Fly   282 TLGWAVRFMVGRTGTACGTDPQAPNESLLTVDGLSNASCASVFLMRYYFGMAACAWWAVLCLGWH 346
            .:.:...|:: .....| .|..|.:.:.....|.....|..:|:|.|:|.||:..||.:|.|.|.
  Rat   361 AVAYIAGFLL-EDRVVC-NDKFAEDGARTVAQGTKKEGCTILFMMLYFFSMASSIWWVILSLTWF 423

  Fly   347 RDIRRHSPDSK-GHVVIPSNFGGSPAKRNSAKTAQQDLTQNNFVCFVAWGLPAFQTSAVIVARFV 410
            .     :...| ||..|.:|                    :.:....||.:||.:|..::....|
  Rat   424 L-----AAGMKWGHEAIEAN--------------------SQYFHLAAWAVPAIKTITILALGQV 463

  Fly   411 DADELLGACFVGNQSDKALQILVATPVFCYWIFGSMNLISGYLVHCRTKEILRNSNALSVQQQLQ 475
            |.|.|.|.||||..:..||:..|..|:|.|...|:..|::|::...|.:.|:::....:  ::|:
  Rat   464 DGDVLSGVCFVGLNNVDALRGFVLAPLFVYLFIGTSFLLAGFVSLFRIRTIMKHDGTKT--EKLE 526

  Fly   476 QLSAHSSSGIGIFLFIYGLACAMLLLAVIYEFANIDVW-------------------LGSGDT-- 519
            :|...    ||:|..:|.:...:::....||.|..|.|                   .|.|..  
  Rat   527 KLMVR----IGVFSVLYTVPATIVIACYFYEQAFRDQWERSWVAQSCKSYAIPCPHLQGGGGVPP 587

  Fly   520 NTPLWP----FLLRAFMELMLGICCFAWV-LGPSISTLYK--RQVSNGKMVKHT 566
            :.|:.|    |:::..|.|::||....|: .|.::::..|  .:::|.|..:.|
  Rat   588 HPPMSPDFTVFMIKYLMTLIVGITSGFWIWSGKTLNSWRKFYTRLTNSKQGETT 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz4NP_511068.2 CRD_FZ4 43..169 CDD:143557 53/125 (42%)
7tmF_Frizzled_SMO 222..557 CDD:320089 82/366 (22%)
TM helix 1 231..256 CDD:320089 3/24 (13%)
TM helix 2 268..289 CDD:320089 5/23 (22%)
TM helix 3 321..347 CDD:320089 11/25 (44%)
TM helix 4 388..404 CDD:320089 5/15 (33%)
TM helix 5 426..455 CDD:320089 9/28 (32%)
TM helix 6 481..508 CDD:320089 6/26 (23%)
TM helix 7 519..544 CDD:320089 7/30 (23%)
Fzd1NP_067089.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 74..99 4/24 (17%)
CRD_FZ1 107..233 CDD:143574 56/137 (41%)
7tmF_FZD1 294..641 CDD:320375 86/385 (22%)
TM helix 1 313..338 CDD:320375 3/24 (13%)
TM helix 2 347..368 CDD:320375 4/20 (20%)
TM helix 3 398..424 CDD:320375 11/25 (44%)
TM helix 4 441..457 CDD:320375 5/15 (33%)
TM helix 5 479..508 CDD:320375 9/28 (32%)
TM helix 6 528..555 CDD:320375 7/30 (23%)
TM helix 7 591..616 CDD:320375 6/24 (25%)
Lys-Thr-X-X-X-Trp motif, mediates interaction with the PDZ domain of Dvl family members. /evidence=ECO:0000250 620..625 0/4 (0%)
PDZ-binding 640..642 1/2 (50%)

Return to query results.
Submit another query.