DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fz4 and Fzd8

DIOPT Version :9

Sequence 1:NP_511068.2 Gene:fz4 / 31659 FlyBaseID:FBgn0027342 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_001037716.1 Gene:Fzd8 / 364754 RGDID:1560525 Length:684 Species:Rattus norvegicus


Alignment Length:734 Identity:178/734 - (24%)
Similarity:282/734 - (38%) Gaps:192/734 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKPTCILCLLVVILLHPRISKSSTSGNPSASSSSSSPPEIPAFRQCETIRIEMCRKIGYNETSMP 65
            ::.|.:|..|.|:        ..:||..:||:...:         |:.|.:.:|:.||||.|.||
  Rat     7 LEVTSLLAALAVL--------QRSSGAAAASAKELA---------CQEITVPLCKGIGYNYTYMP 54

  Fly    66 NLVGNEMQTDVEYTLQTFAPLIEYDCSSQLKLFLCAAYVPMCTP--KAPVHAIGPCRSLCESVRI 128
            |...::.|.:....:..|.||:|..||..||.|||:.|.|:|..  |.|   :.||||:||..:.
  Rat    55 NQFNHDTQDEAGLEVHQFWPLVEIQCSPDLKFFLCSMYTPICLEDYKKP---LPPCRSVCERAKA 116

  Fly   129 RCHPVLQGFGFPWPPALDCDKFPRENNHETMCME------------GPGELHQPQQEQDLYGLPG 181
            .|.|:::.:||.||..:.||:.|.:.|.:|:||:            .|..|..||        ||
  Rat   117 GCAPLMRQYGFAWPDRMRCDRLPEQGNPDTLCMDYNRTDLTTAAPSPPRRLPPPQ--------PG 173

  Fly   182 QGIPGGLGGKLPM---------------DCSGLAKSHLYVRLPRSGRCAPL-----CEADILFTP 226
            :..|.|.|...|.               |.:....|......|..|..||.     |.|.::...
  Rat   174 EQPPSGSGHSRPPGARPPHRGGSSRGSGDTAAAPPSRGGKARPPGGGAAPCEPGCQCRAPMVSVS 238

  Fly   227 AEKH-----------------------------LAEIWVSTWAYAALGLALVATVCLLASDGSRL 262
            :|:|                             ....|:..|:.... ::..|||.....|..|.
  Rat   239 SERHPLYNRVKTGQIANCALPCHNPFFSQDERAFTVFWIGLWSVLCF-VSTFATVSTFLIDMERF 302

  Fly   263 ASAKWSRLLSPLIW---CHNMVTLGWAVRFMVGRTGTAC------------------------GT 300
            ...:     .|:|:   |:..|::|:.||.:.|....||                        |.
  Rat   303 KYPE-----RPIIFLSACYLFVSVGYLVRLVAGHEKVACSGGAPGAGGAGGAGGAATAGAGAAGA 362

  Fly   301 DPQAPN-----------ESLLTVDGLSNASCASVFLMRYYFGMAACAWWAVLCLGWHRDIRRHSP 354
            ...:|.           |..:..:....|.|..|||:.|:||||:..||.:|.|.|         
  Rat   363 GASSPGARGEYEELGAVEQHVRYETTGPALCTVVFLLVYFFGMASSIWWVILSLTW--------- 418

  Fly   355 DSKGHVVIPSNFGGSPAKRNSAKTAQQDLTQNNFVCFVAWGLPAFQTSAVIVARFVDADELLGAC 419
                       |..:..|..:...|    ..:.:....||.:|:.::.||:....||.|.:.|.|
  Rat   419 -----------FLAAGMKWGNEAIA----GYSQYFHLAAWLVPSVKSIAVLALSSVDGDPVAGIC 468

  Fly   420 FVGNQSDKALQILVATPVFCYWIFGSMNLISGYLVHCRTKEILRNSNALSVQQQLQQLSAHSSSG 484
            :|||||...|:..|..|:..|...|:|.|::|::...|.:.:::.....:...:|::|...    
  Rat   469 YVGNQSLDNLRGFVLAPLVIYLFIGTMFLLAGFVSLFRIRSVIKQQGGPTKTHKLEKLMIR---- 529

  Fly   485 IGIFLFIYGLACAMLLLAVIYEFANIDVWLGSGDTNTP----LWP----------FLLRAFMELM 535
            :|:|..:|.:..|:::..:.||..|...|  ....|.|    |.|          |:|:.||.|:
  Rat   530 LGLFTVLYTVPAAVVVACLFYEQHNRPRW--EATHNCPCLRDLQPDQARRPDYAVFMLKYFMCLV 592

  Fly   536 LGICCFAWV-LGPSIST---LYKR--QVSNGKMVKHTSAGA-------ATGHLDGHSSSRGSHAA 587
            :||....|| .|.::.:   |..|  ..|.|..|...:.|:       ..|...||....||..:
  Rat   593 VGITSGVWVWSGKTLESWRALCTRCCWASKGAAVGAGAGGSGPGGGGPGPGGGGGHGGGGGSLYS 657

  Fly   588 CNSTVVSYHSVRTSMASVP 606
            ..||.:::.|...|..|.|
  Rat   658 DVSTGLTWRSGTASSVSYP 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz4NP_511068.2 CRD_FZ4 43..169 CDD:143557 49/139 (35%)
7tm_4 223..544 CDD:304433 85/401 (21%)
Fzd8NP_001037716.1 CRD_FZ8 31..155 CDD:143570 47/135 (35%)
Palmitate-binding groove. /evidence=ECO:0000250 71..78 3/6 (50%)
Wnt-binding. /evidence=ECO:0000250 95..100 1/4 (25%)
Wnt-binding. /evidence=ECO:0000250 147..152 2/4 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..222 14/74 (19%)
PHA03356 <183..219 CDD:177594 4/35 (11%)
Frizzled 264..614 CDD:279827 86/385 (22%)
Lys-Thr-X-X-X-Trp motif, mediates interaction with the PDZ domain of Dvl family members. /evidence=ECO:0000250 605..610 0/4 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 630..655 5/24 (21%)
PDZ-binding. /evidence=ECO:0000250 682..684
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D237456at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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