DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fz4 and lin-17

DIOPT Version :9

Sequence 1:NP_511068.2 Gene:fz4 / 31659 FlyBaseID:FBgn0027342 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_001021813.1 Gene:lin-17 / 171832 WormBaseID:WBGene00003006 Length:558 Species:Caenorhabditis elegans


Alignment Length:617 Identity:151/617 - (24%)
Similarity:238/617 - (38%) Gaps:138/617 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 QCETIRIEMCRKIGYNETSMPNLVGNEMQTDVEYTLQT----FAPLIEYDCSSQLKLFLCAAYVP 105
            :|..|.||:|:.:.||.|..||.:   :..| ::||||    |.||::..|...:..|:|:.:.|
 Worm    27 KCIPIDIELCKDLPYNYTYFPNTI---LHND-QHTLQTHTEHFKPLMKTKCHPHIHFFICSVFAP 87

  Fly   106 MCTPKAPVHAIGPCRSLCESVRIRCHPVLQGFGFPWPPALDCDKFPRENNHETMCMEGPGELHQP 170
            || |.....|:..|:|:||.|:..|..:|:.||..||..|:|.:||           .|.||...
 Worm    88 MC-PIGMPQAVTSCKSVCEQVKADCFSILEEFGIGWPEPLNCAQFP-----------DPPELCMK 140

  Fly   171 QQEQDLYG------LPGQGI------PGGLGGKL----PMDCSGLAKSHLYVRLPRSGRCAPLCE 219
            ..|.::.|      ||.:|.      |.|....|    |.|    .|||          ||..|:
 Worm   141 PTEDEITGGFSAPRLPTKGSSSSSSKPTGCPSDLVDVDPHD----PKSH----------CAFACQ 191

  Fly   220 ADILFTPAEKHLAEIWVSTWAYAALGLALVATVCLLASDGSRLASAKWSRLLSPLIWCHNMVTLG 284
            ::::|:...|.:...|...:|.|..|:||.:.: ..|.|..|....:  |.:..|..|..:.:|.
 Worm   192 SNVMFSTDNKRMVRSWSIWFAAANAGVALFSFL-TFAIDRKRFRFPE--RCVFYLSLCIFISSLP 253

  Fly   285 WAVRFMVG---RTGTACGTDPQAPNESLLTVDGLSNASCASVFLMRYYFGMAACAWWAVLCLGWH 346
            :.....:.   |:..|.|.     ..|.|::....|:.|.:.||:.|:|..||..||.:.....:
 Worm   254 YLTPLFIDAPIRSCHALGN-----GRSYLSIGTFDNSYCLASFLLNYFFSTAAALWWLMFSFTLY 313

  Fly   347 RDIRRHSPDSKGHVVIPSNFGGSPAKRNSAKTAQQDLTQNNFVCFVAWGLPAFQTSAVIVARFVD 411
            .        |.|...:|......                :::|.||||||.:..|..|::...||
 Worm   314 L--------SGGRKWVPEGIEAC----------------SSYVHFVAWGLSSLATIIVLIFNKVD 354

  Fly   412 ADELLGACFVGNQSDKALQILVATPVFCYWIFGSMNLISGYLVHCRTKEILRNSNALSVQQQLQQ 476
            |.||...|.|||.:..||...|..|.....:.|:..::.|:...||.:...|...  :...:|::
 Worm   355 ASELTALCSVGNLNSIALLWFVIVPRTICIVIGTCFIVGGFASMCRERISFRTRG--TDTSKLEK 417

  Fly   477 LSAHSSSGIGIFLFIYGLACAMLLLAVIYEFANIDVWL--------GSGDTNTPLWP----FLLR 529
            |...    :|.|..::.|...:.|:...|:|..:..|.        .||..:.|..|    ::..
 Worm   418 LMVK----MGFFCALFILPNVIELVCQCYKFMILTQWTRMTIDCKQQSGACHRPTPPQAEIYMTA 478

  Fly   530 AFMELMLGICCFAWVLGPSISTLYKRQVSNGKMVKHTSAGAATGHLDGHSSSRGSHAACNSTVVS 594
            ....|..|..|..|||.......:|..:..|                          .|:|..|.
 Worm   479 VISSLATGFSCLMWVLSAKTVHAWKNFIFCG--------------------------MCSSAPVK 517

  Fly   595 YHSVRTS--------MASVPLPPSPYKLKTSP 618
             :.:..|        .|..|.||...::.|:|
 Worm   518 -NPIEPSTRPLLEPPTAPPPQPPVYMQMATNP 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz4NP_511068.2 CRD_FZ4 43..169 CDD:143557 44/127 (35%)
7tm_4 223..544 CDD:304433 76/335 (23%)
lin-17NP_001021813.1 CRD_LIN_17 25..144 CDD:143563 44/132 (33%)
Frizzled 195..506 CDD:279827 80/348 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167738
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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