DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fz4 and mig-1

DIOPT Version :9

Sequence 1:NP_511068.2 Gene:fz4 / 31659 FlyBaseID:FBgn0027342 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_001021744.1 Gene:mig-1 / 171677 WormBaseID:WBGene00003238 Length:529 Species:Caenorhabditis elegans


Alignment Length:643 Identity:160/643 - (24%)
Similarity:245/643 - (38%) Gaps:196/643 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 RQCETIRIEMCRKIGYNETSMPNLVGNEMQTDVEYTLQTFAPLIEYDCSSQLKLFLCAAYVPMCT 108
            ::|:.:..|||..:.||.||.||||..|...|...::.|:.||:...||.|||.|||:.|.|||.
 Worm    24 QRCQKVDHEMCNDLPYNLTSFPNLVDEESWKDASESILTYKPLLSVVCSEQLKFFLCSVYFPMCN 88

  Fly   109 PKAPVHAIGPCRSLCESVRIRCHPVLQGFGFPWPPALDCDKFPRENNHETMCMEGPGELHQPQQE 173
            .|. .:.|||||.||.||:.:|.|||:.|||.||..:.|||||.|||.|.|||:||.|....|.|
 Worm    89 EKL-ANPIGPCRPLCLSVQEKCLPVLESFGFKWPDVIRCDKFPLENNREKMCMKGPNEQGAIQDE 152

  Fly   174 QDLYGLPGQGIPGG------------LGGKLPMDCSGLAKSHLYVRLPRSGRCAPLC-------E 219
            :..:........|.            |.||.|.|         .|.|.||.:|.|||       :
 Worm   153 RAKFAAKESEDDGNDRVEDIQREVDRLNGKCPQD---------EVFLNRSSKCVPLCSNPQKVGQ 208

  Fly   220 AD-------ILFTPAEKHLAEIWVSTWAYAALGLALVATVCLLASDGSRL----ASAKWSRLLSP 273
            .|       :||.    .|:.:.::..:...:||::..         .||    :..:.:...|.
 Worm   209 TDRESATRLLLFL----SLSSVILTILSVFIVGLSIYF---------RRLEMLHSLTETAMFFSC 260

  Fly   274 LIWCHN----MVTLGWAVRFMVGRTGTACGTDPQAPNESLLTVDGLSNASCASVFLMRYYFGMAA 334
            :.:|..    :|::.:..:|.:..|        ...:..|..|.|||:..|:||..:.||....:
 Worm   261 ISFCATSVIYIVSISFKDQFQISCT--------DYTHHLLFVVGGLSHVPCSSVASLIYYTATCS 317

  Fly   335 CAWWAVLCLGWHRDIRRHSPDSKGHVVIPSNFGGSPAKRNSAKTAQQDLTQNNFVCFVAWGLPAF 399
            ..||.::|:.|::..|      ..|::            :.::|.         |..:..|:|..
 Worm   318 RLWWLLICVSWNKATR------TSHIL------------DDSRTR---------VIMLILGIPLA 355

  Fly   400 QTSAVIVARFVDADELLGACFVGNQSDKALQILVATPVFCYWIFGSMNLISGYLVHCRTKEILRN 464
            .....::|:.|.|:.|.|.||:|          .|:| ...|||.....:..:|:         :
 Worm   356 PLMLALLAKAVAANPLTGLCFIG----------AASP-GTDWIFNFCRELILFLI---------S 400

  Fly   465 SNALSVQQQLQQLSAHSSSGIGIFLFIYGLACAMLL-------------LAVIYEFANIDVWLGS 516
            |.|||                        .||..||             :|.:|..|.:...|..
 Worm   401 SIALS------------------------SACCRLLGSDEQDVNGFAGVIAAVYPIAGLFYMLSF 441

  Fly   517 GDTNTPLWPFLL--RAF---------MELMLGICCFAWVLGPSISTLYKRQVSNGKMVKHTSAGA 570
              .|....|||.  |:|         .:|:|.....|:.|   |..|:|...|:.|         
 Worm   442 --VNDATQPFLSLDRSFNAVSATKFSFDLLLSFIMCAFCL---IYLLFKLTRSSSK--------- 492

  Fly   571 ATGHLDGHSSSRGSHAACNSTVVSYHSVRTSMASVPLPPSPYKLKTSPGTGSISLNQM 628
                                  ||....:.::..:|.|..|..::::....:...|.|
 Worm   493 ----------------------VSKEGYQPAVPKLPQPAIPGSVRSNTYASTFRTNNM 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz4NP_511068.2 CRD_FZ4 43..169 CDD:143557 63/124 (51%)
7tm_4 223..544 CDD:304433 67/352 (19%)
mig-1NP_001021744.1 CRD_FZ 23..148 CDD:295308 63/124 (51%)
7tm_4 257..>328 CDD:304433 18/78 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 120 1.000 Domainoid score I3591
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5843
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_109675
Panther 1 1.100 - - LDO PTHR11309
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.860

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