DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8300 and Fam177b

DIOPT Version :9

Sequence 1:NP_572384.1 Gene:CG8300 / 31658 FlyBaseID:FBgn0029937 Length:185 Species:Drosophila melanogaster
Sequence 2:XP_038947085.1 Gene:Fam177b / 102551887 RGDID:7728997 Length:124 Species:Rattus norvegicus


Alignment Length:108 Identity:30/108 - (27%)
Similarity:42/108 - (38%) Gaps:5/108 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KRMLYFSDGVMEELSSGSEDE---ADAEMGDKCYDVHLNESEMPLGPRLRYKASRMGNRFLAGID 104
            ||::||:||.:.......|||   ||.........|.:...|.|........:|......|.|..
  Rat    11 KRIIYFADGDVTGECGTEEDEDRAADTWPCQLSLSVPVGGGEWPASAIDSVASSTYSAFQLVGST 75

  Fly   105 YVGGGLAHLLGITSSKYASELENYHRAKEHGDEDLDNWHPRAM 147
            : ||..|...|:|..|:...|..:.|.:...|..|.. .|||:
  Rat    76 F-GGRFAAFFGLTEPKHQCGLNEHPRTQTKVDGVLPG-PPRAL 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8300NP_572384.1 FAM177 30..140 CDD:291440 26/99 (26%)
Fam177bXP_038947085.1 FAM177 1..104 CDD:405464 25/93 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1572938at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.