Sequence 1: | NP_001259308.1 | Gene: | CG4617 / 31657 | FlyBaseID: | FBgn0029936 | Length: | 418 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523830.2 | Gene: | Ssrp / 37767 | FlyBaseID: | FBgn0010278 | Length: | 723 | Species: | Drosophila melanogaster |
Alignment Length: | 372 | Identity: | 72/372 - (19%) |
---|---|---|---|
Similarity: | 141/372 - (37%) | Gaps: | 75/372 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MESPTSHLVAKDFQVTGVSRSGRVRKKSSKLLDFE-----------SPDEIEKRTRRHSGARQPA 54
Fly 55 RY-SGRGRPSNALRDLDL---------------------DQEMLVDDGII---SDSEEFHPDTTA 94
Fly 95 TVVA-------ILNSDDELDNLVQDIVDGVQAEATSQESSVRQSLYMREKSNKRQVLKDGKVVSA 152
Fly 153 KVQRKDKGKQR--YTAYSLWAKEARQ---KDLQDLDFTSATRRLSELWANVSNRDKNTWRRKAKI 212
Fly 213 EASR--AKTRD-KTAANGATQPASNGSTALADATQHETIFQNRATTS----RTRKLAADRQQSSI 270
Fly 271 EAAAAAAAAAATGTNTQRRSISTRSARSQVSKSATKQAQVHTDADVS 317 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4617 | NP_001259308.1 | HMG-box | 165..218 | CDD:238037 | 13/57 (23%) |
Ssrp | NP_523830.2 | POB3 | 20..499 | CDD:227494 | 27/140 (19%) |
SSrecog | 75..284 | CDD:281523 | |||
PH2_SSRP1-like | 332..427 | CDD:270051 | 13/68 (19%) | ||
HMG_box | 557..620 | CDD:278906 | 14/64 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45449367 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |