Protein Alignment CG4617 and Hmg-2

DIOPT Version :10

• Sequence 1: NP_572383.1
• Gene: CG4617 / 31657
• FlyBaseID: FBgn0029936
• Length: 418
• Species: Drosophila melanogaster
• Sequence 2: NP_611553.1
• Gene: Hmg-2 / 37407
• FlyBaseID: FBgn0026582
• Length: 376
• Species: Drosophila melanogaster
• Alignment Length: 310
• Identity: 52/310 - (16%)
• Similarity: 99/310 - (31%)
• Gaps: 93/310 - (30%)

  Fly   159 KGKQRYTAYSLWAKEARQKDLQDLDFTSATRRLSELWANVSNRDK----------NTWRRKAKIE 213
            |||::       ||..:.:. .|.|..|..::|::...||:...|          |..|.:.:.|
  Fly    41 KGKKK-------AKNPKGRH-SDSDIGSELKKLAQRRINVAGAPKMPLNGYVRFMNDRREELRRE 97

  Fly   214 ASRAKTRDKTAANGA---TQPASNGSTALADATQHETIFQNR----------------ATTSRTR 259
            ..:....:.|...|.   ..|.......:..|.:.:.|:|.:                |...:..
  Fly    98 QPQRTALEHTRIIGEEWHQLPEERKLPYIEAAAKDKAIYQEQLQMFLKEHPEIVANELAKAKKAT 162

  Fly   260 KLAADRQQSSIEAAAAAAAAAATGTNTQRRSIS-------TRSARSQVSKSATKQA--------- 308
            ||....::.:.:..:|...|..|.....:|...       .:..|:|.....|..|
  Fly   163 KLDGSPKEKTPKGESALGKAKKTKAKPVKRQSEDPDDVPLAKVKRAQTPPPPTPPAAPVQPPPSS 227

  Fly   309 ----------------QVHTDADV--SGRTGGQLKQEEVQKTSIEVIDA----------AAHLKL 345
                            .::|:..:  :..|..:|:.....||.:|..:|          |.:.|:
  Fly   228 VPPATPAPRPLQPGEIPIYTNEFIEHNRSTENELRTLRKAKTDLEQQNAVLEQHVDNTKAGYAKV 292

  Fly   346 LGESLTVIGERLKKHNGYVALSGSLSVLLDSLLCAMGPLLCMTTQIPGME 395
            :||...::.|..:       |...|..|...|:.|:|.:     .:|.:|
  Fly   293 MGEVTELMEENQR-------LETYLRALRQKLVAALGGI-----SMPPLE 330

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4617	NP_572383.1	HMG-box_SF	165..216	CDD:438789	12/60 (20%)
Hmg-2	NP_611553.1	HMG-box_HMG20	75..154	CDD:438796	10/78 (13%)