Sequence 1: | NP_001259308.1 | Gene: | CG4617 / 31657 | FlyBaseID: | FBgn0029936 | Length: | 418 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001100882.1 | Gene: | Hmgxb4 / 307667 | RGDID: | 1305783 | Length: | 598 | Species: | Rattus norvegicus |
Alignment Length: | 400 | Identity: | 98/400 - (24%) |
---|---|---|---|
Similarity: | 157/400 - (39%) | Gaps: | 136/400 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 SPTSHLVAKDFQVTGVSRSGRVRKKSSKLLDFESPDEIEKRTRRHSGA-RQPARYSGRGRPSNAL 66
Fly 67 RDLDLDQEMLVDDGIISDSEEFHPDTTATVVAI--LNSDDELDNLVQDIVDGVQAEATSQESSVR 129
Fly 130 QSLYMREKSNKRQVLKDGKVVSAKVQRKDKG----KQRYTAYSLWAKEARQKDLQD---LDFTSA 187
Fly 188 TRRLSELWANVSNRDKNTWRRKAKIEASRAKTRDKTAANGATQPASNGSTALADATQHETIFQNR 252
Fly 253 ATTSRTRKLAADRQQSSIEAAAAAAAAAATGTNTQRRSISTRSARSQVSKSATKQAQVHTDADVS 317
Fly 318 GRTGGQLKQEEVQKTSIEVIDAAAHLKLLGESLTVIGERLKKHNGYVALSGSLSVLLDSLLCAMG 382
Fly 383 PLLCMTTQIP 392 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4617 | NP_001259308.1 | HMG-box | 165..218 | CDD:238037 | 16/55 (29%) |
Hmgxb4 | NP_001100882.1 | DUF4171 | 107..225 | CDD:290491 | |
HMG-box | 400..463 | CDD:238037 | 21/95 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0008243 | |
OrthoInspector | 1 | 1.000 | - | - | oto98255 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_109229 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR46584 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.910 |