Sequence 1: | NP_001259308.1 | Gene: | CG4617 / 31657 | FlyBaseID: | FBgn0029936 | Length: | 418 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_498633.1 | Gene: | hmg-4 / 176052 | WormBaseID: | WBGene00001974 | Length: | 697 | Species: | Caenorhabditis elegans |
Alignment Length: | 291 | Identity: | 56/291 - (19%) |
---|---|---|---|
Similarity: | 100/291 - (34%) | Gaps: | 67/291 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 25 RKKSSKLLDF--------------------ESPDEIEKRTRRHSGARQPARYSGRGRPSNALRDL 69
Fly 70 DLDQEMLVDDGIISDSEEFHPDTTATVVAILNSDDELDNLVQDIVDGVQAEATSQESSVRQSLYM 134
Fly 135 REKSNKRQVLKDGKVVSAKVQRKDKG----KQRYTAYSLWAKEARQKDLQDLD-FTSATRRLSEL 194
Fly 195 WANVSNRDKNTWRRKAKIEASR----------------------AKTRDKTAANGATQPASNGST 237
Fly 238 ALADATQHETIFQNRATTSRTRKLAADRQQS 268 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4617 | NP_001259308.1 | HMG-box | 165..218 | CDD:238037 | 15/75 (20%) |
hmg-4 | NP_498633.1 | SSrecog | 75..285 | CDD:281523 | |
PH2_SSRP1-like | 332..429 | CDD:270051 | 3/18 (17%) | ||
HMGB-UBF_HMG-box | 556..619 | CDD:238686 | 16/62 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160160100 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |