Protein Alignment CG4617 and hmg-4

DIOPT Version :10

• Sequence 1: NP_572383.1
• Gene: CG4617 / 31657
• FlyBaseID: FBgn0029936
• Length: 418
• Species: Drosophila melanogaster
• Sequence 2: NP_498633.1
• Gene: hmg-4 / 176052
• WormBaseID: WBGene00001974
• Length: 697
• Species: Caenorhabditis elegans
• Alignment Length: 291
• Identity: 56/291 - (19%)
• Similarity: 100/291 - (34%)
• Gaps: 67/291 - (23%)

  Fly    25 RKKSSKLLDF--------------------ESPDEIEKRTRRHSGARQPARYSGRGRPSNALRDL 69
            :::::||.|:                    .|.|||:.         ..|..:..||..:...|.
 Worm   410 KEENNKLFDYLNKKNIKIRNSQRVENTVADSSDDEIDP---------YKAAVTAEGRQRDDSDDD 465

  Fly    70 DLDQEMLVDDGIISDSEEFHPDTTATVVAILNSDDELDNLVQDIVDGVQAEATSQESSVRQSLYM 134
            ..|::..:|..|....|    |..::.......|||.|:..:....|........|..|......
 Worm   466 STDEDYDLDKDIKKKKE----DKESSEGTGSEPDDEYDSGSEQDSSGTGESEPDSEQDVPSKRRK 526

  Fly   135 REKSNKRQVLKDGKVVSAKVQRKDKG----KQRYTAYSLWAKEARQKDLQDLD-FTSATRRLSEL 194
            .|...||:..:..:....|..:|||.    |:..:||..|...:|.:..:|.| .....::....
 Worm   527 GEPKEKREKKEKREKKEGKKGKKDKDPNAPKRATSAYMQWFLASRNELKEDGDSVADVAKKGGAK 591

  Fly   195 WANVSNRDKNTWRRKAKIEASR----------------------AKTRDKTAANGATQPASNGST 237
            |..:|:.||..|..||:.:.||                      :||..|::...:::..|....
 Worm   592 WKTMSSDDKKKWEEKAEEDKSRYEKEMKEYRKNGPPSSSSKPSSSKTSKKSSGPSSSKAISKEYI 656

  Fly   238 ALADATQHETIFQNRATTSRTRKLAADRQQS 268
            :.:|.:..|       ...:..|.||.:::|
 Worm   657 SDSDDSDDE-------EPKKKEKKAAPKEES 680

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4617	NP_572383.1	HMG-box_SF	165..216	CDD:438789	13/51 (25%)
hmg-4	NP_498633.1	POB3	20..444	CDD:227494	4/33 (12%)
		MSCRAMM_ClfA	<485..597	CDD:468110	22/111 (20%)
		HMG-box_SF	558..622	CDD:469606	15/63 (24%)