Sequence 1: | NP_001259308.1 | Gene: | CG4617 / 31657 | FlyBaseID: | FBgn0029936 | Length: | 418 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491688.1 | Gene: | hmg-3 / 172250 | WormBaseID: | WBGene00001973 | Length: | 689 | Species: | Caenorhabditis elegans |
Alignment Length: | 309 | Identity: | 72/309 - (23%) |
---|---|---|---|
Similarity: | 121/309 - (39%) | Gaps: | 51/309 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 DFQV---TGVSR--SGRVRKKSSKLLDFESPDEIEKRTRRHSGARQPARY--------------- 56
Fly 57 SGRGRPSNALRDLDLDQEMLVDD-GIISDSEEFHPDTTATVVAILNSDDELDNLVQDIVDGVQAE 120
Fly 121 ATSQESSVRQSLYMREKSNKRQVLKDGKVVSAKVQRKDK-------GKQRYTAYSLWAKEARQKD 178
Fly 179 LQDLD-FTSATRRLSELWANVSNRDKNTWRRKAKIEASR--AKTRDKTAANGATQPASNGSTALA 240
Fly 241 DATQHETIFQNRATTSRT------RKLAADRQQSSIEAAAAAAAAAATG 283 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4617 | NP_001259308.1 | HMG-box | 165..218 | CDD:238037 | 15/55 (27%) |
hmg-3 | NP_491688.1 | POB3 | 20..497 | CDD:227494 | 24/109 (22%) |
SSrecog | 75..285 | CDD:281523 | |||
PH2_SSRP1-like | 332..429 | CDD:270051 | 12/37 (32%) | ||
HMGB-UBF_HMG-box | 561..624 | CDD:238686 | 17/62 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160160099 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |