Protein Alignment CG4617 and Dsp1

DIOPT Version :10

• Sequence 1: NP_572383.1
• Gene: CG4617 / 31657
• FlyBaseID: FBgn0029936
• Length: 418
• Species: Drosophila melanogaster
• Sequence 2: NP_001138203.1
• Gene: Dsp1 / 117294
• FlyBaseID: FBgn0278608
• Length: 397
• Species: Drosophila melanogaster
• Alignment Length: 267
• Identity: 44/267 - (16%)
• Similarity: 90/267 - (33%)
• Gaps: 83/267 - (31%)

  Fly   118 QAEATSQESSVRQSLYMREKSNKRQVLKDGKVVSAKVQRKDKGKQRYTAYSLWAKEARQKDL--- 179
            |.:...|:...:|...|:::..::.|:.....:| :|:...|.:.|.|||:.:.:..|::..
  Fly   142 QQQQQQQQQQHQQQQQMQQQQQQQNVINSASPMS-RVKADAKPRGRMTAYAYFVQTCREEHKKKH 205

  Fly   180 --QDLDFTSATRRLSELWANVSNRDKNTWRRKAKIEASR--AKTRDKTAANGAT----------- 229
              :.:.|...:|:.:|.|..:.:::|..:...|:.:..|  |:.::.....||.
  Fly   206 PDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDKQRYEAEMQNYVPPKGAVVGRGKKRKQIK 270

  Fly   230 QP----------------------ASNGSTALAD-----------------------ATQHETIF 249
            .|                      |.|....:.|                       |.:.:..:
  Fly   271 DPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARY 335

  Fly   250 QNRAT---TSRTRKLAADRQQSSIEAAAAAAAAAATGTNTQRRSISTRSARSQVSKSATKQAQVH 311
            :...|   ||....::|...|:|::|.|..||..|.....|.:.:.                :.|
  Fly   336 EREMTEYKTSGKIAMSAPSMQASMQAQAQKAALLAAAAQQQHQQLE----------------EQH 384

  Fly   312 TDADVSG 318
            .|.|..|
  Fly   385 DDDDGDG 391

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4617	NP_572383.1	HMG-box_SF	165..216	CDD:438789	10/55 (18%)
Dsp1	NP_001138203.1	HMG-box_HMGB_rpt1	182..250	CDD:438794	14/67 (21%)
		HMG-box_NHP6-like	262..342	CDD:438792	6/79 (8%)