Protein Alignment CG4617 and Dsp1

DIOPT Version :9

• Sequence 1: NP_001259308.1
• Gene: CG4617 / 31657
• FlyBaseID: FBgn0029936
• Length: 418
• Species: Drosophila melanogaster
• Sequence 2: NP_001138203.1
• Gene: Dsp1 / 117294
• FlyBaseID: FBgn0278608
• Length: 397
• Species: Drosophila melanogaster
• Alignment Length: 267
• Identity: 44/267 - (16%)
• Similarity: 90/267 - (33%)
• Gaps: 83/267 - (31%)

  Fly   118 QAEATSQESSVRQSLYMREKSNKRQVLKDGKVVSAKVQRKDKGKQRYTAYSLWAKEARQKDL--- 179
            |.:...|:...:|...|:::..::.|:.....:| :|:...|.:.|.|||:.:.:..|::..
  Fly   142 QQQQQQQQQQHQQQQQMQQQQQQQNVINSASPMS-RVKADAKPRGRMTAYAYFVQTCREEHKKKH 205

  Fly   180 --QDLDFTSATRRLSELWANVSNRDKNTWRRKAKIEASR--AKTRDKTAANGAT----------- 229
              :.:.|...:|:.:|.|..:.:::|..:...|:.:..|  |:.::.....||.
  Fly   206 PDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDKQRYEAEMQNYVPPKGAVVGRGKKRKQIK 270

  Fly   230 QP----------------------ASNGSTALAD-----------------------ATQHETIF 249
            .|                      |.|....:.|                       |.:.:..:
  Fly   271 DPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARY 335

  Fly   250 QNRAT---TSRTRKLAADRQQSSIEAAAAAAAAAATGTNTQRRSISTRSARSQVSKSATKQAQVH 311
            :...|   ||....::|...|:|::|.|..||..|.....|.:.:.                :.|
  Fly   336 EREMTEYKTSGKIAMSAPSMQASMQAQAQKAALLAAAAQQQHQQLE----------------EQH 384

  Fly   312 TDADVSG 318
            .|.|..|
  Fly   385 DDDDGDG 391

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4617	NP_001259308.1	HMG-box	165..218	CDD:238037	11/59 (19%)
Dsp1	NP_001138203.1	HMG-box	182..252	CDD:294061	14/69 (20%)
		HMGB-UBF_HMG-box	275..339	CDD:238686	4/63 (6%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45450766
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930