DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4615 and MMD2

DIOPT Version :10

Sequence 1:NP_572382.1 Gene:CG4615 / 31656 FlyBaseID:FBgn0029935 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_001094070.1 Gene:MMD2 / 221938 HGNCID:30133 Length:270 Species:Homo sapiens


Alignment Length:258 Identity:103/258 - (39%)
Similarity:131/258 - (50%) Gaps:52/258 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 YQPTEIEQVANVITHGIWILPAVFAAIKLFERSSSASQYLVAWVYGGALCMLFTVSTFFHCSCYC 143
            |||||.|..||..||..||:|::..:..|:..|....:.:.||:||..||.||.|||.||...:.
Human    28 YQPTEYEHAANCATHAFWIIPSILGSSNLYFLSDDDWETISAWIYGLGLCGLFVVSTVFHTISWK 92

  Fly   144 AEHKPPKNVKAWPCLGWQTYQGLKNVLHRCDRAMIYVFIAGSYFPWLTLEN----TDHSAILFCM 204
            ..|                .:.:::.||..||.:||.|||.||.|||.|..    ..|      |
Human    93 KSH----------------LRMVEHCLHMFDRMVIYFFIAASYAPWLNLRELGPWASH------M 135

  Fly   205 EWVIWLMAGIGIAYQQVFHE------------------------RYKCLETFFYLVMGLGPALVV 245
            .|::|:||.:|..|...|||                        |||.:|...|:|||..||||:
Human   136 RWLVWIMASVGTIYVFFFHERTGSCVQFLRGEACPKAGTACLPARYKLVELLCYVVMGFFPALVI 200

  Fly   246 VFTGHHFHGMMQLKFGGGFYILGIVFFKADGTIPMAHAIWHLFVVLAAGCHYYAILVNLY-PS 307
            : :..:..|:.:|..||.||.||:||||:||.||.|||||||||...||.|||||...|| ||
Human   201 L-SMPNTEGIWELVTGGVFYCLGMVFFKSDGRIPFAHAIWHLFVAFGAGTHYYAIWRYLYLPS 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4615NP_572382.1 hlyIII 85..304 CDD:273425 94/246 (38%)
MMD2NP_001094070.1 HlyIII 34..258 CDD:470885 94/246 (38%)

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