DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4615 and paqr4b

DIOPT Version :9

Sequence 1:NP_572382.1 Gene:CG4615 / 31656 FlyBaseID:FBgn0029935 Length:313 Species:Drosophila melanogaster
Sequence 2:XP_001920113.1 Gene:paqr4b / 100148532 ZFINID:ZDB-GENE-121214-338 Length:278 Species:Danio rerio


Alignment Length:149 Identity:30/149 - (20%)
Similarity:44/149 - (29%) Gaps:70/149 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 CDRAMIYV-------------FIAGSYF-----PWLTLENTDHSAILFCMEWVIWLMAGIGIAYQ 219
            |.|::.|:             ||....|     ||..::           ||  |    |||.: 
Zfish    38 CLRSLFYLHNEFGNIYTHGVPFICFLLFLPVSIPWAEVD-----------EW--W----IGIVH- 84

  Fly   220 QVFHERYKCLETFFYLVMGLGPALVVVFTGHHFHGMMQLKFGGGFY-------ILGIVFFKADGT 277
                          ||.. |.|.:..||    :|..|..:.|...|       :.|:......|.
Zfish    85 --------------YLAC-LSPTICSVF----YHLFMNHEGGAPIYDTLLCFDMFGVCLVNTLGA 130

  Fly   278 IPMAHAIWHLFVVLAAGCH 296
            :|:.|        :...||
Zfish   131 LPIIH--------ITLLCH 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4615NP_572382.1 hlyIII 85..304 CDD:273425 30/149 (20%)
paqr4bXP_001920113.1 HlyIII 43..252 CDD:296067 28/144 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.